Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00402 ATGGGAGAAGAAAGAGGCGTGGCAGACAAGAAAGTGACAAAGAACGAGGTGGTTCTACGAATTTCAGACACTGAAGAAGCCATGAATGCAAAGAAGGAGCAAATAGACTATAGAAGTCTTCCGGTAGCTGAAAACAGTTCCCTTTCTCCTCAGCACAATACCCAGATAGGTGAAGGGTTTAGAGATTCTCATGGTGAAATCACAGAGCTCAATAGTCAAGTCTCCACGGACTTGGTGAAAACTACAAAGAGGTTGATGGGTAGGTCGGAGTTTCCGAGGCCAAAGTCCAGAATGGTGGAACCACCGTGTCCAAAAGATGCAAACTTTGTTGAAGAAAAGGCTCAAATGACAAGTTCACCTGCAAGGAATGTTCCTGACGCAACTATTGCCACCCCAAGAAGCCCCTTGCTTGGTACACCATGGGAAGAAGAAGACGATGATGAAGAAGTGTACAAGATTGCAAATATTGAAGTGAGCAGGAGATCTGGTAAGAAGTGGAGAGTTGTTGAGTTGTTTGCTTTTGCTTGCATCATGGGATCTTTTATTGCAAGCTTGACTGTGAATGAGTTGCAAAAGAGGTTGATTTGGGGATTGGAACTGTGGAAATGGTGTGTCTTGGTTTTGGTTATCCTCTGTGGTAGACTGGTCACTGAGTGGTTTATCAATGTTTTGGTTTTCTTGATTGAGAGGAACTTTTTATTTAAGAAGAAGGTTTTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAGGGCTTTATATGGATAAGTTTGGTTCTTTTGACATGGAGTTTGCTTTTCAACCATGGAGTAGAGAGAACCGGAAAGGTTACTAGGATTCTTAATTACATTACTAGGGCCCTTGCTTCTTGTGTTATTGGAGCAGCTATATGGTTAGTCAAAACATTGCTGATAAAACTTTTAGCTTCAAAATTTCAATCTACTAGATTTTTTGACAGAGTGCAAGAATCAATCTTTCATCAATACATTCTTAAGACTCTTTCAGGTCGTCCCTCGATTGAGGTGGCTGAAAATGTAGGTTGGATTTCAAATAGTGGCCAACTCAGTTTTAAGACCATGAATAATGAAGACGAAGGGGAGAAACAACAAGTCATTGATGTAGACAAACTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTGGACTATGAAAGGGTTGATTAATGTGATAAGGAGTTCTGGGTTGTCTACCATCTCCTATGCACCGGATGAAGATGAGAATGACAAGAGAGATAATGAAATTAATAGCGAGTGGGAAGCAAAGGCTGCTGCATACAGAATATTTGGGAACGTAGCCAAGCCAGGACACAGGTATATTGAGAAGGATGACCTCTTGCGATTCATGAAAATTGAAGAAGTGGAAAATGTGCTTCCACTATTTGAAGGGGCGGTTGAGACTGGAAGAATTAAGAGGAAGTCTCTCAAGAACTGGCTGGTAAAAGTCTACTTTGAACGTCGAGCACTCGTACATTCACTAAATGATACCAATACAGCTGTTGATGACTTGAATATGCTTGCTTCTTTGGTTGTGGTTGTTGTGATCATTACTTTGTGGCTCCTTACAATGGGTTTCTTAACAACCCAAGTTCTGGTCTTTATTTCATCTCAGCTTTTACTTGTGGTTTTCATGTTTGGCAACACAGCTAAAACTGTATTTGAAGCTATTATATTTGTTTTTGTGATGCACCCATTTGATGTTGGGGATCGCTGTGTTATCGATGGAGTTCAGATGGTTGTAGAAGAGATGAGCATACTAACTACCGTCTTTTTGAGATATGACAATGAAAAGATTTTCTATCCAAATTCAGTGCTGGCTACCAAACCAATCAGTAACTTCTACAGGAGTCCAGAAATGAGTGATTGTGTTGAATTTGCTGTTGATTTTTCTACTTCTATTGAAAGCATTGGAACTTTAAAGGCAAAGATAAGAGGATATTTGGAGAGTAGACCTCAACACTGGCGTCCCAACTACAGCTTATTGGTTAAGGAAATTGAGAATGTAAGTAAGATGAAAATGGCTCTAAATGTTACTCACACCATAAATTTTCAGAACTATTGCGATAAGAACAGCCGAAGATCCGAATTAGTCCTGGAGTTAAAGAAAATTCTTGAAGATCTTAATATTAAATATCATCTGCTGCCACAAGAAGTTCATCTCAGTTATGTAACGTCACAAGACTCAACAGCACAGACCCTTTGA 2217 0.396 MGEERGVADKKVTKNEVVLRISDTEEAMNAKKEQIDYRSLPVAENSSLSPQHNTQIGEGFRDSHGEITELNSQVSTDLVKTTKRLMGRSEFPRPKSRMVEPPCPKDANFVEEKAQMTSSPARNVPDATIATPRSPLLGTPWEEEDDDEEVYKIANIEVSRRSGKKWRVVELFAFACIMGSFIASLTVNELQKRLIWGLELWKWCVLVLVILCGRLVTEWFINVLVFLIERNFLFKKKVLYFVYGVKKSVQGFIWISLVLLTWSLLFNHGVERTGKVTRILNYITRALASCVIGAAIWLVKTLLIKLLASKFQSTRFFDRVQESIFHQYILKTLSGRPSIEVAENVGWISNSGQLSFKTMNNEDEGEKQQVIDVDKLKKMKQEKVSAWTMKGLINVIRSSGLSTISYAPDEDENDKRDNEINSEWEAKAAAYRIFGNVAKPGHRYIEKDDLLRFMKIEEVENVLPLFEGAVETGRIKRKSLKNWLVKVYFERRALVHSLNDTNTAVDDLNMLASLVVVVVIITLWLLTMGFLTTQVLVFISSQLLLVVFMFGNTAKTVFEAIIFVFVMHPFDVGDRCVIDGVQMVVEEMSILTTVFLRYDNEKIFYPNSVLATKPISNFYRSPEMSDCVEFAVDFSTSIESIGTLKAKIRGYLESRPQHWRPNYSLLVKEIENVSKMKMALNVTHTINFQNYCDKNSRRSELVLELKKILEDLNIKYHLLPQEVHLSYVTSQDSTAQTL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00402 738 Gene3D - 569 618 IPR023408 -
Lapu9g00402 738 Pfam Mechanosensitive ion channel 511 715 IPR006685 GO:0016020|GO:0055085
Lapu9g00402 738 SUPERFAMILY Sm-like ribonucleoproteins 559 618 IPR010920 -
Lapu9g00402 738 PIRSF Memb_At2g17000 3 738 IPR016688 -
Lapu9g00402 738 FunFam Predicted mechanosensitive ion channel 569 618 - -
Lapu9g00402 738 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 10 728 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00402 Lapu-Chr9 4261988 4265300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00402 81 726 Mechanosensitive Ion Channel Family AT5G12080 51.813 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00402 K22048 - gmx:100777332 1177.93