Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00394 ATGATGAATGGAAGGAACAGGTTCCCCTTCACCCCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTCATCTACAAGTACATGGCTTCAGGAATTTCCATTCCACCTGATCTTCTCTTCACAATAAAAAAGAGCTACTTTGATTCCCCTCTGTCCTCAAGGCTTTTGCCTAACCAGCCACAGCACTTTGGATGGAACTACCTGCAGATGGGTTTGGGGAGAAAAATAGACCCTGAGCCTGGTAGATGTAGAAGAACTGATGGCAAGAAATGGAGGTGCTCCAAAGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAGCAACACCAACAGCAAACGCAAATGCTTCAACTCAACAACCAATCTCATCAATCACCAAACTTAATACTGTCAATACTCTTTCTCCTCTTGCCTCATCTGAAACACACCAACACCACCCTCCACACTATGCCTCCTTTCTCTATCAGCACCCTCCATCAAGATCCTCTGGCATTGGCTTGTCCTTTGAAGACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAGTCCAACACAGATTGCAGGAGCAGGTATGCTTACGGAGAGAAAGAAGAGGTGGATGAGCATGCTTTCTTCACAGAGCCATGTGGTATCATGAAAAGCTTTTCTGCTTCCTCTATGGATGATTCTTGGCAACTCACACCATTGACTATGAGCTCCTCCTCTTCTTCCACCAAACAGAGGAGTTCCTTTGGCTTGTCCAATGATTATTCTTGCTTGCAACTTCAGACCCACTCAAAGCAGCAAGAGCAACAAGATCAGGGTGGTTGCTACATGCTAGGTGGAGGACAACTTGGAAAAGAAGAACCTCAGAAAACCGTTCATCGCTTCTTTGATGAATGGCCCCACAAAGGAAGACAAGGATCTTGGCTTGATTTGGATGACAAATCTTCAACAACCCAACTATCAATTTCCATTCCCACCTCTTCTCATGATTTTCCAGCCTTCAGTTCCAGAACCCACCATGATGGTTGA 1071 0.4547 MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKKSYFDSPLSSRLLPNQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKATPTANANASTQQPISSITKLNTVNTLSPLASSETHQHHPPHYASFLYQHPPSRSSGIGLSFEDNSAPLFLDTGSCSQSNTDCRSRYAYGEKEEVDEHAFFTEPCGIMKSFSASSMDDSWQLTPLTMSSSSSSTKQRSSFGLSNDYSCLQLQTHSKQQEQQDQGGCYMLGGGQLGKEEPQKTVHRFFDEWPHKGRQGSWLDLDDKSSTTQLSISIPTSSHDFPAFSSRTHHDG* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00394 356 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu9g00394 356 MobiDBLite consensus disorder prediction 334 356 - -
Lapu9g00394 356 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu9g00394 356 PANTHER GROWTH-REGULATING FACTOR 5 8 344 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lapu9g00394 356 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Lapu9g00394 356 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu9g00394 356 Pfam WRC 78 120 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00394 Lapu-Chr9 4192909 4195724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00394 7 120 GRF Transcription Factor Family AT3G13960 70.175 4.60e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lapu9g00394 WRC 7.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00394 - - gmx:100814271 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00394 9 4192909 4195724 Lapu9g00394 9 4192909 4195724 ECH
Lapu3g00492 3 5050216 5052142 Lapu9g00394 9 4192909 4195724 PCT