Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00384 ATGACCCTCATGAAAGTCATTTGGAAATCCATCTTCCCGGGTTGCTATAAGGGTGAGTATCCCTCTCCCAAGCCAAAGAAGGTGGTGGCTACGAAGCCAAATTCTTCTCACAGGATTTCAGTGACGGATTTGAGTTATCCAAGCACGACTCTTTCAGAGGATCTCTCCATTTCTCTGGCGGGGACTAACCTGCATGTTTTCTCACTTGCCGAGCTCAAGATTATCACGCAGTCTTTCTCTTCTAGCAACTTTCTAGGAGAAGGTGGGTTCGGACCAGTGCATAAAGGGTTCATTGATGACAAGCTTAGACATGGCCTTAAGGCTCAACCCGTGGCTGTTAAGCTCTTGGACTTGGATGGCTCGCAGGGCCACAAAGAGTGGTTGACTGAAGTTGTTTTTCTGGGACAACTAAGGCATCCACATCTGGTGAAGCTGATAGGATACTGTTGTGAAGAAGAACACAGACTTTTGGTATATGAATATTTACCTAGAGGCAGCTTGGAGAATCAATTATTTAGAAGATTCACAGCATCACTACCATGGTCGACGAGAATGAAAATTGCTGTTGGGGCTGCCAAGGGTCTAGCCTTTCTTCATGAAGCCGAGAAGCCTGTCATCTATAGAGATTTCAAAGCTTCAAACATCTTGTTAGACTCTGATTACAATTCAAAGCTATCTGATTTTGGGTTGGCAAAAGACGGTCCCGAAGGAGATGACACCCACGTTTCAACACGAGTTATGGGCACACATGGATACGCAGCCCCAGAATATGTGATGACAGGTAACTTTATAATTTTCAATTCCACAACTAATCCACTTGTCTAG 825 0.4473 MTLMKVIWKSIFPGCYKGEYPSPKPKKVVATKPNSSHRISVTDLSYPSTTLSEDLSISLAGTNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRFTASLPWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNSKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYVMTGNFIIFNSTTNPLV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00384 274 SUPERFAMILY Protein kinase-like (PK-like) 45 262 IPR011009 -
Lapu9g00384 274 FunFam Serine/threonine-protein kinase BIK1 46 161 - -
Lapu9g00384 274 Gene3D Transferase(Phosphotransferase) domain 1 162 269 - -
Lapu9g00384 274 ProSiteProfiles Protein kinase domain profile. 79 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00384 274 Pfam Protein tyrosine and serine/threonine kinase 83 263 IPR001245 GO:0004672|GO:0006468
Lapu9g00384 274 PANTHER OS01G0588500 PROTEIN-RELATED 44 262 - -
Lapu9g00384 274 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Lapu9g00384 274 FunFam Os07g0541700 protein 162 249 - -
Lapu9g00384 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00384 Lapu-Chr9 4085613 4087091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00384 65 263 Glycoside Hydrolase AT3G07070 54.455 7.86e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu9g00384 PK_Tyr_Ser-Thr 8.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00384 - - gmx:100797003 523.087