Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00378 ATGGCACGCGAGTTCAACGATGTTGCAGCAACGCTCCAATCCATACGCTACAACCGCGGTTCCCTCCACCTTCTCGATCAGAGAAAGCTTCCTCTGGAGACCACTTACTTGGAAATTCGGGATTCAACAGATGGCTGGAATGCCATTCGGGATATGGTGGTCCGGGGAGCACCTGCTATTGCGATTGCAGCGGCACTCTCTTTGGCTGTGGAGGTGTTCAATTTAGATGGTTTCAATGGGTCAGCTGGTGAAGCTGTTTCCTTCCTGCAGAGTAAATTAGAATATCTTGTCTCAAGTCGGCCAACTGCAGTGAATCTATCGGATGCTGCGACAAAACTCAAAGAAGTCATATCAGAAGCTGCTGCTACCACTTCAGAGGGCAGGAGTGTTTTCCAGGCATTTATAGAAGCAGCTGAAGTTATGCTTGAGGACGATGTTGCCTCAAATCGAGCTATTGGCTCTTATGGAGCTAGTTGTATTCAGCAACAAACAGAGAAACGAAAGCTTTCTGTTTTGACTCATTGTAATACTGGAAGTCTAGCCACAGCAGGATATGGTACTGCTTTGGGTGTGATCCGTGCACTTCACAGTGGAGGAGTTTTAGAAAGGGCTTATTGCACCGAAACACGCCCATTTAATCAAGGATCTAGACTTACTGCCTATGAGTTGGTGCATGAAAAAATACCGTCAACTCTGATTGCTGATTCTGCTGCAGCTGCATTAATGCAAGCAGGACGTGTGGATGCTGTCGTTGTTGGGGCTGATCGTGTTGCATCAAACGGTGACACAGCCAACAAAATTGGAACCTACAGTGTTGCCTTGTCCGCGAAGTTTCATAATGTACCTTTTTATGTGGCTGCACCCCTCACTTCCGTTGATCTATCACTTTCTTCTGGACAAGAAATTGTGATTGAGGAGAGGTCTCCCAATGAATTGTTGAACGCACGTGGAGGACTTGGAGAACAGGTTGCTGCCTCGGGAATTTCTGTGTGGAACCCAGCTTTTGATGTTACTCCTGCTAATCTAATATCTGGGATCATCACGGAGAAGGGTGTCATTACGAAGACTTCTGCTGGTGATGCATTTGACATCAAAGCTTTCGTACAGAAAACAGGTTAA 1119 0.4647 MAREFNDVAATLQSIRYNRGSLHLLDQRKLPLETTYLEIRDSTDGWNAIRDMVVRGAPAIAIAAALSLAVEVFNLDGFNGSAGEAVSFLQSKLEYLVSSRPTAVNLSDAATKLKEVISEAAATTSEGRSVFQAFIEAAEVMLEDDVASNRAIGSYGASCIQQQTEKRKLSVLTHCNTGSLATAGYGTALGVIRALHSGGVLERAYCTETRPFNQGSRLTAYELVHEKIPSTLIADSAAAALMQAGRVDAVVVGADRVASNGDTANKIGTYSVALSAKFHNVPFYVAAPLTSVDLSLSSGQEIVIEERSPNELLNARGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKTSAGDAFDIKAFVQKTG* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00378 372 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 40 355 IPR011559 GO:0044249
Lapu9g00378 372 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 13 355 IPR005251 -
Lapu9g00378 372 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 9 369 - -
Lapu9g00378 372 FunFam Methylthioribose-1-phosphate isomerase 10 201 - -
Lapu9g00378 372 Pfam Initiation factor 2 subunit family 54 354 IPR000649 GO:0044237
Lapu9g00378 372 Gene3D - 202 367 IPR042529 -
Lapu9g00378 372 SUPERFAMILY NagB/RpiA/CoA transferase-like 10 357 IPR037171 -
Lapu9g00378 372 Gene3D - 10 201 IPR027363 -
Lapu9g00378 372 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 12 364 IPR005251 -
Lapu9g00378 372 FunFam Methylthioribose-1-phosphate isomerase 167 365 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00378 51 370 Eukaryotic Initiation Factors Gene Family AT2G05830 77.259 8.07e-173 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00378 K08963 - gmx:100799311 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00378 9 4010247 4013483 Lapu9g00378 9 4010247 4013483 ECH