Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00373 ATGGCCGCTGTTCACCGCTTCCTCCTTCTCCACTTCTTCTTCCTCTTCTTCTCTCTCTCTTCTTCCACCGAAACTCAATCCCTCCTCCGTCTCAAACAATCCCTCACCAACGCCGATCGCTCTCTCTCCTCATGGATCCCCAACGTCTCGCCTTGCTCCGGCACCTGGCTCGGCGTTGTCTGCTTCAACGGCGTCATCACGGGTCTGCACCTCTCCGACTTGGGCCTCTCTGGCCCAATCGATGTCGGCGCGCTGGCGGAGATTCGCGGCCTCAGAACCCTTAGCTTCATCAACAACTCCTTCTCGGGTCCAATCCCGGAGTTCAACAAACTGGGCTCAATCAAGTCGCTCCTATTAACCCAAAACCGTTTCTCCGGAACAATTCCAAACGACTTTTTCTCCTCGATGAACTCTCTCAAGAAACTTTGGCTCTCCGGCAACCGCTTTTCCGGTGGCATCCCCCAATCCCTAACCCAGCTCGACCTCCTCAAAGAGCTGCACCTCGAGTACAACTCATTCTCCGGCATAATCCCCAACTTCCGCCAAGACCTAAAATCGCTGGACCTCTCCTTCAACAAACTCGAAGGCCCCATTCCCGATACTCTGGCGAGGTTCACCGTGGACTCTTTCGTCGGAAACGACGCACTGTGTGGGAAGCCTTTGTTGAAGACGTGCGAGGTTTCCGCCACGTCATACTCGACGGCGAGCAACGTGGGAGAGGAAGAGTACGGGAACAGCTGGGCGAGGAAGGTGATCGTGGTGCTGGTGGTGGCGGTGGTGGCGTCGTTGATGTTTCTGTTTTTGACGCGGAAGCGGCGGGGGGAGTTCACGGCGGTGAGCAGGAGAAGCAGCGCGGAGGAGGTTGTGGCGGTGCAGGTGCCGAGCGTGAGGGGGAGCGTGGGTGAGAGGAGGGAGAACAAGAAGGGGGACATAGTGATGGTGAACGAGATGAGGGGGGTGTTTGGTCTGCAGGACATGATGAAGGCGGCGGCGGAGGTGCTGGGGAACGGGGCCCTGGGGTCGGCATACAAGGCGGCGATGGCAACTGGGCTGTGCGTGGTGGTGAAGAGGATGAGGGAGATGAATAAGATTGGGAAGGAGGTGTTCGACGCCGAGATGAGGCAGTTCGGCAGGATACGACACCGTAACATCATCACTCCCCTCGCTTACCACTACCGTAGGGAGGAGAAGCTCTTCATCACCGAGTACATGCCCAAAGGAAGCTTGTTCTATGTCTTGCACGGTGATAGAGGCCTATCCCATTCTGAACTCACATGGCCTACCCGTTTGAAGATCGTTAAGGGAATTGCAAGAGGATTGAGCTTTCTTTACACTGAATTTTCCACTTATGACTTGCCCCATGGAAACCTTAAGTCTTGCAATGTTCTCTTAAGTGATGACTATGAGCCTCTCTTGAGTGATTATGCCTTTCAACCACTAATCAACCCCAGCGTTGCAGTGCAGGCATTGTTTGCCTTCAAATCCCCAGACTATGTGCAGAACCAGAAAGTTTCACAGAAGACCGATGTTTACTGTCTTGGAATCATCATTCTTGAAGTCATCACAGGGAAGTTCCCTGCTCAGTATCACAGTAATGGCAAGGGTGGAACTGATGTTGTGCAATGGGCTCATTCTGCAGTTTTTGAAAAAAGAGAAGCGGAGTTGATTGATGTAGAATTGCCAAATGACACGAATTCACGCAACCAGATTCTACAACTTCTCCATATCGGGGTTGCCTGCACTGAAAGCAGCCCTGATCAGAGACTAATGATGAAGGAAGCTATTAGAAGGATAGAGGAGGTATAG 1806 0.5305 MAAVHRFLLLHFFFLFFSLSSSTETQSLLRLKQSLTNADRSLSSWIPNVSPCSGTWLGVVCFNGVITGLHLSDLGLSGPIDVGALAEIRGLRTLSFINNSFSGPIPEFNKLGSIKSLLLTQNRFSGTIPNDFFSSMNSLKKLWLSGNRFSGGIPQSLTQLDLLKELHLEYNSFSGIIPNFRQDLKSLDLSFNKLEGPIPDTLARFTVDSFVGNDALCGKPLLKTCEVSATSYSTASNVGEEEYGNSWARKVIVVLVVAVVASLMFLFLTRKRRGEFTAVSRRSSAEEVVAVQVPSVRGSVGERRENKKGDIVMVNEMRGVFGLQDMMKAAAEVLGNGALGSAYKAAMATGLCVVVKRMREMNKIGKEVFDAEMRQFGRIRHRNIITPLAYHYRREEKLFITEYMPKGSLFYVLHGDRGLSHSELTWPTRLKIVKGIARGLSFLYTEFSTYDLPHGNLKSCNVLLSDDYEPLLSDYAFQPLINPSVAVQALFAFKSPDYVQNQKVSQKTDVYCLGIIILEVITGKFPAQYHSNGKGGTDVVQWAHSAVFEKREAELIDVELPNDTNSRNQILQLLHIGVACTESSPDQRLMMKEAIRRIEEV* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00373 601 Pfam Leucine Rich Repeat 184 202 IPR001611 GO:0005515
Lapu9g00373 601 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Lapu9g00373 601 ProSiteProfiles Protein kinase domain profile. 328 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00373 601 SUPERFAMILY L domain-like 24 205 - -
Lapu9g00373 601 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Lapu9g00373 601 SUPERFAMILY Protein kinase-like (PK-like) 332 597 IPR011009 -
Lapu9g00373 601 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 601 IPR046959 -
Lapu9g00373 601 Gene3D Ribonuclease Inhibitor 182 227 IPR032675 -
Lapu9g00373 601 Gene3D Ribonuclease Inhibitor 21 181 IPR032675 -
Lapu9g00373 601 Pfam Protein kinase domain 332 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00373 601 Gene3D Phosphorylase Kinase; domain 1 298 403 - -
Lapu9g00373 601 Gene3D Transferase(Phosphotransferase) domain 1 404 601 - -
Lapu9g00373 601 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 79 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00373 Lapu-Chr9 3953488 3957437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00373 7 601 Receptor kinase-like Gene Family AT3G42880 50.476 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu9g00373 Pkinase 2.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00373 - - gmx:100790660 916.376