Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00372 ATGGCTTTAGCAGTTTCCTCCACCGCATTGTCAAGTCTTCCAAACAGAGAAATACGTCCAAAGGTTAATTTGGCCGAAAGAACAGGCACATGGTTGGGTTTGAGCAGAAGAACAACTGCAAATGCAACAAAAGGAGTGTCAGCTGTGTGTGAGCCACTTCCTCCAGATAGGCCATTGTGGTTCCCTGGTAGTTCCCCTCCTGAGTGGCTTGATGGCAGTCTTCCTGGTGATTTCGGTTTTGACCCTCTTGGATTAGGGTCTGATCCAGAGTTGCTAAAGTGGTTCGCTCAAGCTGAACTGATGCATGGAAGATGGGCAATGCTTGCAGTGTTTGGAATTCTGGTTCCGGAGTTGCTGGAAAGAATTGGTTACGTTGAGAACTTCAACTGGTACGAAGCTGGCGCGCGAGAGTATTTTACAGACCACACTACTCTGTTCGTTGTGCAAATGGGCCTGATGGGCTGGGTGGAGGGTCGAAGATGGGCCGACATGCTTAACCCAGGATGCGTTGACATTGAGCCCAAAGTGCCTCACATTACGAACCCGACTCCGGATGTTGGGTACCCGGGTGGGTTGTGGTTTGACCCGATGATGTGGGGTCGTGGGTCACCTGAACCCGTGATGGTGTTGAGGACGAAGGAGATAAAGAATGGAAGACTTGCAATGCTGGCATTTGTAGGGTTCTGGTTCCAAGCGATTTACACTGGCGCAGATCCCATTGATAATTTGATGGCCCACCTTGCTGATCCTGGTCACTGCAACATTTTCTCGGCTTTCACGCGGTAG 786 0.5038 MALAVSSTALSSLPNREIRPKVNLAERTGTWLGLSRRTTANATKGVSAVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHGRWAMLAVFGILVPELLERIGYVENFNWYEAGAREYFTDHTTLFVVQMGLMGWVEGRRWADMLNPGCVDIEPKVPHITNPTPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGADPIDNLMAHLADPGHCNIFSAFTR* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00372 261 Gene3D Chlorophyll a/b binding protein domain 67 252 - -
Lapu9g00372 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 6 260 IPR001344 GO:0009765|GO:0016020
Lapu9g00372 261 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Lapu9g00372 261 FunFam Chlorophyll a-b binding protein, chloroplastic 67 252 - -
Lapu9g00372 261 SUPERFAMILY Chlorophyll a-b binding protein 56 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00372 Lapu-Chr9 3948540 3950634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00372 55 260 Chloroplast and Mitochondria Gene Families AT3G61470 67.476 7.45e-102 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00372 K08908 - gmx:100812066 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00372 9 3948540 3950634 Lapu9g00372 9 3948540 3950634 ECH