Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00362 ATGGCGCTGCAATTTCTTCTCCTTCTGCTCTCTCTCTTCGCTGTTGCTGCTCTTGGACTCACTTCCAATGCGACACTGAACGAAACTTGTGGATACTTCGATGGTTCTCTCACTAGAGATACAAAAGTACCTTGCCCAATTGGTTGGGTTATGGACCCTAACAAGACCAAGTGTTTTCTTCATGTTGGGAGGCCTCAATCTTGGAATGACTCAGAGACCTGTTGTAGTAAGTATGGTGGACATTTAGCGTCATTGTCATCACTTCAGGAGCTACAATTTGCTCAGAGCCTATGTGGTGAATCTGTGAATAGTTGCTGGATTGTTGGACAAAGGCGCAACACTACAGCTGGTTATCAGTGGATGTGGTCTGACAATTCACCAGGGAATAACTCCATATTTCCATTGGAAGATGTTCCTCCCCATTGTAATGGAACTGGACTGTCCTGTCATAGAAACAGTACAGACAATTTATGCACAGTAATGACTAATAATTCAAACTCTCTCATCAGTGAGAGATGCGACAATCCTCACTCTTCTCTGTGTATACTTGATATAGATGCAGCCTGTAACCGTATGCACTGCCATAGGGATTATTACCTTATCATCCTCATAGTGGTGAGTGTCTTGATACTCTCCACAACATTAGCAGTGGTAGTTTGGCTTCTTGTATATAAACGGGGCAAGAAAAGAAGGCGGTCTAGAAAAATATCTATTCCAGGAGCTTCTCTTCCATCATGGAAAGTCTTTACCAAAGAGGAATTAAGGTCAATTACAAAGAATTTCAGTGAAGGTAACCGTCTTGTTGGGGATACCAAGACTGGTGGCACATACAGTGGGGTTTTATCAGATGGTTCAAGAGTTGCAGTTAAGAGATTAAAGAGGACAAGCTTTCAGAGGAAAAAGGAGTTTTATTCTGAAATTAGCAGGGTTGCTAGGCTTCGTTATCCCAATCTGGTTGCCGTGATGGGATGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGCTAATGGTCCCTTAGATAAATGGCTACATCACATACCTAGGGGAGGTCGCAGCGTAGATTGGGCTATGAGGATGAAAATTGCTACAACGCTTGCACAAGGAATTGCGTTTCTGCATGACAAGGTTAAGCCACAAGTGGTGCATCGAGATATACGTGCAAGCAATGTACTGGTGGATGAGGAGTTTGGTGCACACCTGATGGGTGTTGGTCTGTCCAAGTTTGTGCCATACGAAGCAATGCATGATAGGACTGTCATGGCAGGTGGAACTTATGGATATCTTGCTCCAGAGTTTGTGTATAGAAACGAGCTTACAACAAAGAGTGACGTATATAGTTTTGGTGTCCTACTACTTGAAATAGTTAGTGGACGTAGACCTACACAGGCAGTTGATTCTGTTGGTTGGCAGAGTATATTTGAATGGGCAACTCCTCTTGTGCAAGTTCATCGCTATCATGAACTCTTGGATCCTCATATAACTTCATCCTCTTCTAGCATCATCCCAGAGGCTAGTACCATCCAAAAAGTTGTTGACCTTGTTTATTCGTGCACGCAGCATGTTCCTTCTATGCGCCCTAGAATGTCGCATGTTGTTCACCAGCTGCAACAGATTGCCCAACCACCTGCGAAGTAA 1647 0.4359 MALQFLLLLLSLFAVAALGLTSNATLNETCGYFDGSLTRDTKVPCPIGWVMDPNKTKCFLHVGRPQSWNDSETCCSKYGGHLASLSSLQELQFAQSLCGESVNSCWIVGQRRNTTAGYQWMWSDNSPGNNSIFPLEDVPPHCNGTGLSCHRNSTDNLCTVMTNNSNSLISERCDNPHSSLCILDIDAACNRMHCHRDYYLIILIVVSVLILSTTLAVVVWLLVYKRGKKRRRSRKISIPGASLPSWKVFTKEELRSITKNFSEGNRLVGDTKTGGTYSGVLSDGSRVAVKRLKRTSFQRKKEFYSEISRVARLRYPNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSVDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLVDEEFGAHLMGVGLSKFVPYEAMHDRTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPTQAVDSVGWQSIFEWATPLVQVHRYHELLDPHITSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQIAQPPAK* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00362 548 Gene3D Phosphorylase Kinase; domain 1 240 337 - -
Lapu9g00362 548 ProSitePatterns Tyrosine protein kinases specific active-site signature. 384 396 IPR008266 GO:0004672|GO:0006468
Lapu9g00362 548 Gene3D Transferase(Phosphotransferase) domain 1 338 544 - -
Lapu9g00362 548 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 338 548 - -
Lapu9g00362 548 Pfam Protein tyrosine and serine/threonine kinase 272 539 IPR001245 GO:0004672|GO:0006468
Lapu9g00362 548 ProSiteProfiles Protein kinase domain profile. 262 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00362 548 FunFam C-type lectin receptor-like tyrosine-protein kinase 239 337 - -
Lapu9g00362 548 SMART CLECT_2 45 182 IPR001304 -
Lapu9g00362 548 Gene3D - 33 193 IPR016186 -
Lapu9g00362 548 CDD CLECT 57 181 - -
Lapu9g00362 548 SUPERFAMILY Protein kinase-like (PK-like) 235 540 IPR011009 -
Lapu9g00362 548 Pfam Lectin C-type domain 65 181 IPR001304 -
Lapu9g00362 548 SMART tyrkin_6 271 539 IPR020635 GO:0004713|GO:0006468
Lapu9g00362 548 ProSiteProfiles C-type lectin domain profile. 54 182 IPR001304 -
Lapu9g00362 548 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 85 543 - -
Lapu9g00362 548 SUPERFAMILY C-type lectin-like 36 182 IPR016187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00362 Lapu-Chr9 3793085 3797993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00362 75 545 Receptor kinase-like Gene Family AT1G52310 69.167 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Lapu9g00362 PK_Tyr_Ser-Thr 5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00362 - - vra:106762676 1026.93