Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00357 ATGGATAGCGGTGTAGGCTACAAATTGACAGGAATTAGGCAGATTGTGAGGATAAGGGAAATGCTGCAGAAGTGGCAGAATGTGACTTTAGGGACAAAACCTCCCATCCCCACCATTTCTGATCAAGCGGCTAATGAAGGGAGCATGATGCCTTTAATCAACAAAAGGGTAGTGAATGTTATGAACTGTGAATCCGACACGGAAGAGTCTTGCCAAAGTCCTGAACCGCTTCCACCACCTGATGTTCCAGAGGGATACTTGGCAGTGTATGTTGGACCTGAGCTCAGGAGGTTCATCATTCCCACCACCTACCTCAGCCACTCTCTCTTCAAAGTTTTGCTGGAAAAAGCTGCAGAGGAATTTGGGTTTGATCACAATGGCGGCCTCACCATCCCTTGTGAGATTGAGACCTTCAAGTACCTACTCAAGTGCATAGAGAATGAGCAGAAAGAGCAACTCAATGATACCACCCGTAAGTTTTTGCATATTCATATTACTGAA 501 0.4571 MDSGVGYKLTGIRQIVRIREMLQKWQNVTLGTKPPIPTISDQAANEGSMMPLINKRVVNVMNCESDTEESCQSPEPLPPPDVPEGYLAVYVGPELRRFIIPTTYLSHSLFKVLLEKAAEEFGFDHNGGLTIPCEIETFKYLLKCIENEQKEQLNDTTRKFLHIHITE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00357 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 67 141 IPR003676 GO:0009733
Lapu9g00357 167 Pfam Auxin responsive protein 77 145 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00357 Lapu-Chr9 3737306 3737977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00357 1 152 Calmodulin-binding Proteins AT3G43120 64.474 3.79e-69 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00357 K14488 - gmx:100527570 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00357 9 3737306 3737977 Lapu9g00357 9 3737306 3737977 ECH
Lapu3g00452 3 4642402 4644572 Lapu9g00357 9 3737306 3737977 PCT