Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00353 ATGGCGTCTTCGGAGAATGAACCTTCTTCTCACTCTTCTCCTCCTCCACCTCCCGCACATATTTGTATGCAAAAGTTCCGGCTCTATGAGACTCTATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACTTATTGGAGAGTGTTAAAGATTGACCGTCTAGATCCCTCTGTGCTGAGTGTGCTAGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTGTTGAGACGTATACATGAGGGGAACAGGTCAACAGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATAAAATTTTTAGGGCCATACTACATGGTGCTAATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCAAAGAGTGAGATGATTCCGCTGCAAAATCCTTCTGTTCAATCTAGCATCGATGAGAACAGATACAAGAAGCTCTTATTCATGGTTGACCTTACCAAGGATTTCTTTTTTAGCTACTCGTACTATATCATGCGTAGTCTTCAAAGGAATTTGTGTGATAGTGAGACAGGCCATGTCCTTTATGAGACCATGTTTGTCTGGAATGAGTTTTTGACTCGAGGAATTAGGAATCACCTTCAGAATACTATTTGGACCGTTGCACTAGTGTACGGCTTTTTTAAACAGGAAACACTTGCAATATCTGGGCGGGAGTTCATTCTTACTCTCATTGCAAGACGGTCTCGCCATTATGCTGGCACTAGGTATTTGAGACGAGGATTAAATGACAAGGGTAGAGTAGCAAATGATGTGGAGACAGAGCAAATTGTATTTGAGGATGTTCCTGAAGGTCTTCCAGTCCAAATATGCTCTGTTGTCCAGAATCGAGGTTCAATCCCTCTGTTCTGGTCGCAGGAAACTTCACGTCTAAATCTTAAGCCTGATATTATATTGTCAAAGAAAGATCAGAATTATCAAGCCACCAGACTTCACTTTGAGAATCTTGTCAAAAGATATGGGAATCCCATAATAATTTTGAATTTGATAAAGTCACGTGAGAGGACACCTCGTGAGTCCATTCTTCGTTCTGAGTTTGGTAATGCTATTAATTTCATTAACAAAGATTTATCAGAGGAGAACAGGTTGAGGTTTCTTCATTGGGATCTTAAACATTTTCAGAGCAAAGCTACAAATGTTTTGCTACTTCTGGGAAAAGTGGCTGCATATGCTTTGACATTAACAGGTTTTTTATATTGCCAAGTGTCACCAACTCCTAGACCCGAAGAATGTATAGAATGGCCATCTATTAATTTTGCATATGACAATATTGATAAGGGAAGCTTTCAACACGCAAGACATGTTGATGTTGACAATGAAGATGGTAATAATTTAGAGAGGAAACCTTGTGGAGAAAACAACCATGTTAACGGAAATCATTTTGTCAAGCCACCCAGGTTCCAGAGAGGGGTTCTTCGAACTAATTGTATAGACTGCTTAGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTTCATGCTCTGGGAATTATTGACCACCTGAAAATTGACCTTAATGATCCTGTAAGTGATAATTTGATGGGATTTTACGAGCGGATGGGTGACACACTTGCACACCAATATGGTGGTTCAGCTGCACACAACAAGATATTCTCTGAGAGGAGGGGACAATGGAAAGCTGCAACACAATCCCAGGAGTTCTTTAGGACTCTTCAACGATATTACAGCAATGCTTACATGGATGCTGAGAAGCAAAATGCAATTAACATATTCCTGGGGCATTTTCAGCCACAAGTGGGTAAGCCTGCTCTGTGGGATTTGGGCTCAGATCAACATTATGATATAGGGAGGCATGGGGATGATGATGCAAGGTCATTTGTCAAAAGGTGTTTCTCAGATGGAAGCATCATTCATGGCAAGTCCACACCTACGTCAATCCCAAATCCAAATCTTGAAAATTTTTCAAAGCTAGGTTTGCAGAACCAATCAGAAGAAGGAAGCAATGCTTTTTGTGACTCATTACCTGAAATATCAACATTTGGGAGTGACATGGCATTTTCAAGGTACACTCCCTCAATGCCTCGTAGACAGCTTTTTGGAGACGCACTAAGAGAGCGGTACCTTGATAGTGAACATATTTCCCATTCTGCACACGAGGTTTCATTCAGCAGTTCCAACTTTGTTGACCTGGATTGGCTGTCTTCTTCAGGAAATTCATTTGAAGAAGAGCCATTTGAGAGGCTTTCAATCGTCGATTCTTCTATTGCTGGAAATTCTTCTATTGCTGGGAACTCTTCTATTGCTGGGAATTCTTCAGAAAATGTTATCAATGGAGTTCTTATGGGAGGAGATACTCCCTCCACTAGCGATTTAGACTTAAACACTAAGTATTGGCAGGGAAGAGAGCGAACTGGGTCAGAGTTATCCTACCGTGATGCCCAGTCCAAAGTTCTAGAGGAATATCCTGACACTTTTGTAGAATGGGTGAATTATGGACAGACACTTTGCAATTGA 2547 0.4107 MASSENEPSSHSSPPPPPAHICMQKFRLYETLSNFYMIGRDKSRTYWRVLKIDRLDPSVLSVLEDSTTYTESECSDLLRRIHEGNRSTGGLKFVTTCYGIVGFIKFLGPYYMVLITKRRQIGAICGHTVYAVSKSEMIPLQNPSVQSSIDENRYKKLLFMVDLTKDFFFSYSYYIMRSLQRNLCDSETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQETLAISGREFILTLIARRSRHYAGTRYLRRGLNDKGRVANDVETEQIVFEDVPEGLPVQICSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKSRERTPRESILRSEFGNAINFINKDLSEENRLRFLHWDLKHFQSKATNVLLLLGKVAAYALTLTGFLYCQVSPTPRPEECIEWPSINFAYDNIDKGSFQHARHVDVDNEDGNNLERKPCGENNHVNGNHFVKPPRFQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIDHLKIDLNDPVSDNLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWKAATQSQEFFRTLQRYYSNAYMDAEKQNAINIFLGHFQPQVGKPALWDLGSDQHYDIGRHGDDDARSFVKRCFSDGSIIHGKSTPTSIPNPNLENFSKLGLQNQSEEGSNAFCDSLPEISTFGSDMAFSRYTPSMPRRQLFGDALRERYLDSEHISHSAHEVSFSSSNFVDLDWLSSSGNSFEEEPFERLSIVDSSIAGNSSIAGNSSIAGNSSENVINGVLMGGDTPSTSDLDLNTKYWQGRERTGSELSYRDAQSKVLEEYPDTFVEWVNYGQTLCN* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00353 848 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 10 797 IPR043573 GO:0043813|GO:0046856
Lapu9g00353 848 Pfam SacI homology domain 98 389 IPR002013 GO:0016791
Lapu9g00353 848 ProSiteProfiles Sac phosphatase domain profile. 158 554 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00353 Lapu-Chr9 3669402 3684334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00353 23 848 Acyl Lipid Metabolism Gene Families AT3G43220 59.807 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00353 K22913 - gmx:100786438 1427.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00353 9 3669402 3684334 Lapu9g01979 9 34641162 34664708 ECH
Lapu9g00353 9 3669402 3684334 Lapu9g00353 9 3669402 3684334 ECH
Lapu3g00442 3 4491137 4503097 Lapu9g00353 9 3669402 3684334 PCT