Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00337 ATGGTTGGCTCTGTCACTGTCAAGTCCGAGGTTTCCCTTCTAGAATCTTCTCCCCCGCCTGTGGAGAAACCTCAAAGAGTTTGTTCCAACACGGAAGAACACCACCTGGTCCAGCCCAATATGCATGACTCTTCACCCAACAAGTCAGTGCCTGCATCTGGACTTAATGCAGTGATTCCTAGTACAAACCAGCTTACCATCTTCTACAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCAGAAAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCCAAGTCTACTGAAATGAAAAAGATTGAGACCCAATCTACCCTCATTTCACCTGTTCCCACAAGGCCTTCTTCTCCACATGGAATCACTAATAATATTGCTTCCTCACAGAAGAATTCCATCTGCAGGCTGCAAGAATTTCCAATAGCACGCAGGCATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGATAGGCTGGGTAGCAAAGCTCCTTATCCTTCCTCGTCAACCACTAAAGTGGCTGATAACATAGAGAACAACTTTTGTGCTGACAATGCACCAGAACTGATTTCCTTGAATCGAGCAGAGGAGGAAATTCATCCAACCTTCTCTGCCTCTTGA 624 0.4567 MVGSVTVKSEVSLLESSPPPVEKPQRVCSNTEEHHLVQPNMHDSSPNKSVPASGLNAVIPSTNQLTIFYNGSVCVYDGIPAEKVHEIMLIAAAAAKSTEMKKIETQSTLISPVPTRPSSPHGITNNIASSQKNSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSSTTKVADNIENNFCADNAPELISLNRAEEEIHPTFSAS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00337 207 ProSiteProfiles Tify domain profile. 58 93 IPR010399 -
Lapu9g00337 207 MobiDBLite consensus disorder prediction 1 26 - -
Lapu9g00337 207 Pfam tify domain 60 92 IPR010399 -
Lapu9g00337 207 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 42 175 IPR040390 -
Lapu9g00337 207 SMART tify_2 58 93 IPR010399 -
Lapu9g00337 207 Pfam Jas motif 142 166 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00337 Lapu-Chr9 3508910 3513771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00337 63 173 Tify Gene Family AT5G20900 52.846 1.06e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lapu9g00337 tify 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00337 K13464 - gmx:100306045 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00429 3 4339421 4342410 Lapu9g00337 9 3508910 3513771 PCT