Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00330 ATGGAAGAAAAATCTTCGTTAAAAAATTTGCTGAAATATGAAGAAAGGCCTTATGATACTAATACGACAACCGATGAACCCTCCCTTCACAATTCTATGGGATCTACTCTTCTCGGCTTGAGCCTGAATAACTCTGAACAGCCCCTTAACCAAATGGGCATGCTTCGAATCAAGCTTGAGGAAGCAAAGAAAGAGAATGAAATCTTAAAAGCTATGCTAAATCAGGTTAATGAACACTGCACTGCTCTTCAGAATCGCATACTTTTTGAGATGCAGCAGCATCAACTATCTTCATCATCTTGCAATAATAACAATAATCATGACTTGCAGGGAAAAATACAAGATTTGGAGAAACCAATGCTACACACTAGACAGTTTTTGAATATTGGTGAGTGTTCTTCACTTTTAGAGGGTTACACAGAAAACGTTGAAAAGAAAATATTAGGCAGAAGCATGGAAAGTGACATAAACAATGTTGAAAGTGAAATGAACAAAAAAATAACACTGCATGAAGCAAAATGCATAGAAGATCAAGCATCTGAGGTTACTTGCAGGAGAGCTAAAGTGTCCATCAGAGCACGATCAGATTTTTCTTTGATCGGAGATGGGTGTCAATGGAGAAAGTACGGCCAAAAGACGGCGAAAGGCAACCCTTGTCCTCGAGCCTACTACCGTTGCAGCATGGGAACTGCATGTCCAGTTCGTAAGCAGGTGCAGAGGTGTTTTAAGGATGAGACTGTTCTCATCACAACCTATGAAGGGAACCATAACCATCCACTCCCACCAGCAGCAAGACCTTTGGCAAGCTCAACATCAGCAGCATTGAACATGTTCCTTTCTGGCTCAATCACAAGTTCAAATGGCAGCACCAACTCACCCCTCTTCTCTTCATCACTATCTACTATTTCTCCAACTGCAGCAGTAGCTACTTTCTCCCACAATGCAACATGTCCCACAGTAACACTGGACTTGACCCACCCCAACAGCAATAACTATCTCCAATTCCAAAGGGCCACCACCACTTCACAATGCCACACACACCCTTTTTCCAACCTTGTTAACCCCAGAGAAAAACCTTGCATTGGTGGATGTTGTCAGTGA 1101 0.4214 MEEKSSLKNLLKYEERPYDTNTTTDEPSLHNSMGSTLLGLSLNNSEQPLNQMGMLRIKLEEAKKENEILKAMLNQVNEHCTALQNRILFEMQQHQLSSSSCNNNNNHDLQGKIQDLEKPMLHTRQFLNIGECSSLLEGYTENVEKKILGRSMESDINNVESEMNKKITLHEAKCIEDQASEVTCRRAKVSIRARSDFSLIGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGNHNHPLPPAARPLASSTSAALNMFLSGSITSSNGSTNSPLFSSSLSTISPTAAVATFSHNATCPTVTLDLTHPNSNNYLQFQRATTTSQCHTHPFSNLVNPREKPCIGGCCQ* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00330 366 MobiDBLite consensus disorder prediction 1 21 - -
Lapu9g00330 366 SMART WRKY_cls 200 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00330 366 ProSiteProfiles WRKY domain profile. 195 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00330 366 SUPERFAMILY WRKY DNA-binding domain 194 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00330 366 Coils Coil 52 86 - -
Lapu9g00330 366 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 45 339 IPR044810 GO:0003700
Lapu9g00330 366 Gene3D WRKY domain 185 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00330 366 FunFam probable WRKY transcription factor 31 185 262 - -
Lapu9g00330 366 Pfam WRKY DNA -binding domain 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00330 366 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00330 Lapu-Chr9 3398074 3402287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00330 39 325 WRKY Transcription Factor Family AT4G04450 40.061 1.22e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g00330 WRKY 7.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00330 - - gmx:100781603 459.914