Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00326 ATGTCGGTCGCAGAAACTGCTTGTTCATACGCATCTCTCATCCTTCACGATGAAGGAATCTCCGTCACTGCCGACAATATCGTCACCTTGTTGAAAACTGCGAAGGTTCAAGTCGATTCTTTTTGGCCTGCCTTGTTTGCTAAACTTGCCGAGAAGAAACATCTTGGCGATTTGATAGCAAATGCTGCAGGCGGTGGGGCACCAGTTGCTGTTGCAGCTGCCCCAGTTGCTGCTGCAGGTGGAGGTGCTGCCGCCACCCCTGCTGCCGAGGAGAAAAAGAAGGAAGAACCTGAAGAAGAGAGTGATGATGATATGGGATTCGGCTTGTTCGATTAG 336 0.506 MSVAETACSYASLILHDEGISVTADNIVTLLKTAKVQVDSFWPALFAKLAEKKHLGDLIANAAGGGAPVAVAAAPVAAAGGGAAATPAAEEKKKEEPEEESDDDMGFGLFD* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00326 111 Hamap 50S ribosomal protein L12 [rpl12]. 6 111 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lapu9g00326 111 Pfam 60s Acidic ribosomal protein 22 110 - -
Lapu9g00326 111 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 111 - -
Lapu9g00326 111 MobiDBLite consensus disorder prediction 81 111 - -
Lapu9g00326 111 FunFam 60S acidic ribosomal protein P1 1 63 - -
Lapu9g00326 111 Gene3D - 1 62 IPR038716 -
Lapu9g00326 111 MobiDBLite consensus disorder prediction 96 111 - -
Lapu9g00326 111 CDD Ribosomal_P1 5 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00326 Lapu-Chr9 3334589 3336986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00326 1 111 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 54.386 6.83e-37 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00326 K02942 - gmx:100791962 125.176