Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00325 ATGGCCATTATAACCGTTGGGAGAAAAGAGGGGCATGGAAAACGACTTGGGAAATACGACTTGGGAAGGACTCTTGGAGAAGGAAATTTTGGAAAGGTCAAGTTGGCAAGGGACACTAATTCTGGGAAGCTTTTTGCCGTTAAGATCCTTGACAAGAGCAAGATCATTGACCTCAATAACACTGATCAGATAAAGAGGGAAATATCTACCTTGAAGCTTCTGAAGCATCCGAATGTGGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGATACTTGAGTACGTGAATGGAGGAGAGTTATTTGACAAAATTGCATCCAAAGGTAAACTTAAAGAAGCTGAAGGTAGGAAGATGTTCCAACAGTTGACTGATGGTGTGAGCTACTGCCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATGTACTTGTCGATGCCAAAGGGAACATAAAGATAACCGATTTTAACCTTAGTGCTTTGCCCCAGCATTTTAGGGATGATGGGTTACTTCATACTACTTGTGGAAGTCCCAACTATGTTGCCCCTGAGATTCTTGCTAATAAAGGCTATGATGGTGGAACATCAGATATATGGTCATGTGGAGTTATCTTGTATGTAATTCTTACAGGATACCTTCCTTTCGATGATAGAAATCTTGCAGTTCTTTATCAAAAGATTTTTAAAGGAGACGTTCAGATACCAAGATGGTTATCACCTGGTGCTCAAAACATTATAAAAAGAATGCTTGATCCAAATCCTAAAACGCGGATAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAGGAGGGTTATACTCCTGCAAATCCAGAAGATGAGGAAGAGGGTGTCTACATTGATGATGAAGCTTTTTCCATCCATGATGTGTCACTTGAATCGGAACAGGGTAGTCCAACATCACCAACACTGATCAATGCATTTCAGTTGATAGGGATGTCTTCAAGTCTAGATCTCTCAGGCCTTTTTGAGAACGAGGATGTTTCTGAGAGGAAGATAAGGTTTACATCCACCCATTCACCAAAAGATTTGGAGGAGAGGATAGAAGACATTGTAACAGGAATGAGATATAGATTCCAGAAGAAAAATGGGATGTTGAAAGTGATACAAGATATCAAAGCACAGAAAAGTCTAGGTAGTCTTTCAGTGACAATAGAGGTATTTGAAATTAGTCCAACATTGTACGTAGTAGAGTTAAGCAAGTCTTGTGGAGATGCTTCTGTATATAGACAGTTGTGCCAGAAGTTATCAAATGAACTGGGTTTGGACCCAAACCAACAGCTAGGGAGCTCAGAAATGATAGGCCTACTAAAAAATAATTTGTAA 1362 0.3957 MAIITVGRKEGHGKRLGKYDLGRTLGEGNFGKVKLARDTNSGKLFAVKILDKSKIIDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMILEYVNGGELFDKIASKGKLKEAEGRKMFQQLTDGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHFRDDGLLHTTCGSPNYVAPEILANKGYDGGTSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPRWLSPGAQNIIKRMLDPNPKTRITMAMIKEDEWFKEGYTPANPEDEEEGVYIDDEAFSIHDVSLESEQGSPTSPTLINAFQLIGMSSSLDLSGLFENEDVSERKIRFTSTHSPKDLEERIEDIVTGMRYRFQKKNGMLKVIQDIKAQKSLGSLSVTIEVFEISPTLYVVELSKSCGDASVYRQLCQKLSNELGLDPNQQLGSSEMIGLLKNNL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00325 453 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00325 453 SUPERFAMILY Protein kinase-like (PK-like) 15 323 IPR011009 -
Lapu9g00325 453 CDD CIPK_C 318 429 - -
Lapu9g00325 453 Pfam NAF domain 314 373 IPR004041 GO:0007165
Lapu9g00325 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lapu9g00325 453 SMART serkin_6 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00325 453 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Lapu9g00325 453 FunFam Non-specific serine/threonine protein kinase 10 98 - -
Lapu9g00325 453 Gene3D Kinase associated domain 1, KA1 317 434 - -
Lapu9g00325 453 ProSiteProfiles Protein kinase domain profile. 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00325 453 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Lapu9g00325 453 FunFam Non-specific serine/threonine protein kinase 314 435 - -
Lapu9g00325 453 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 417 - -
Lapu9g00325 453 FunFam Non-specific serine/threonine protein kinase 12 314 - -
Lapu9g00325 453 Gene3D Transferase(Phosphotransferase) domain 1 11 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00325 Lapu-Chr9 3311931 3318085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00325 82 440 CBL-interacting serine-threonine protein kinases AT3G17510 68.975 3.56e-171 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lapu9g00325 Pkinase 7.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00325 K07198 - gmx:100815660 785.408