Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00321 ATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACATTTGTTTTTGGGTTGAAAGTGTGGGTACTAATGGGAATAATAGTTGGGTTATTCATTGTAATCATTCTTGTGGTGCTATCAATATGTCTCACTTTAAGAAAGAAGTTCAGAAGAGTCAATGGCAAGCTTCCACTTAGCCATGTGTTATCTGTTTCAGAAGAGATCAAAGAAATCAGAGTTGATCAGGTTTCGGCAAATAATCATCCACAGAATGGTACTTTTATGAGTCTGAATGACAAATTTGGTGACGGGGAGTCTGAAAAGGTTTTGAACCAAACACAGAATGTAGACAATAGTAGTCAATCAGGCTCATTTAATCATTTAGAGAAAGATGCCAATGACTCTCAATCAGGTGAAGAAAGTGGTGCCAAAGGAATTTCTTCTTATAGGTCTTCTTTGCATCCTATAACCGCACCATCTCCTTTGTCTGGTCTGCCTGAATTCTCGCAGCTTGGCTGGGGCCACTGGTTTACATTAAGGGACCTAGAGCTTGCAACAAACAGATTTTCAAAAGAAAATGTTATTGGGGAAGGTGGATACGGAATTGTTTATCGAGGTCAATTAATCAATGGGAGTCCTGTGGCCGTGAAGAAGCTCCTCAATAATTTAGGACAAGCCGAGAAGGAATTCAGGGTGGAGGTTGAGGCTATAGGTCATGTGCGGCATAAGAACTTAGTTAGACTTTTGGGCTACTGCATTGAAGGCACTCACAGGTTGTTGATTTATGAGTACGTTAACAATGGCAATTTAGAGCAGTGGCTTCACGGGGCCATGCGGCAGCATGGCTTTCTTACTTGGGATGCTCGGATAAAAATTCTCCTTGGAACAGCCAAAGCGCTGGCTTATTTGCACGAGGCAATTGAACCAAAAGTTGTGCATAGAGATATTAAGTCAAGCAATATTCTAATTGATGACGAATTTAATGCCAAAATATCTGATTTTGGGCTGGCTAAGTTACTTGGCGCTGGAAAAAGTCATATTACAACCAGAGTAATGGGTACTTTTGGATATGTAGCTCCAGAATATGCCAATTCTGGCTTGCTAAATGAGAAGAGTGATGTTTACAGCTTTGGGGTATTGCTCCTTGAAGCAATTACAGGAAGAGACCCCGTTGATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTCGACTGGCTCAAGATGATGGTAGGTTTTCGACGCTCAGAAGAGGTTTTGGATCCCAACATTGAGACTAGGCCATCGACAAGTGCCCTTAAACGATCCCTCTTGACTGCTTTGAGGTGTGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTTGTCCGCATGCTTGAATCAGAAGAATATCCTATATCTAGAGAGGATCGAAGACGCAGGAAGAGTCAGGCAGGAAACATGGAGGTGGAGACTCATTCTGATACAGATAAGAGTGACAATGCAGATTATAAGTCCAATGGCAGAAGGAAATAA 1497 0.4208 MASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIVIILVVLSICLTLRKKFRRVNGKLPLSHVLSVSEEIKEIRVDQVSANNHPQNGTFMSLNDKFGDGESEKVLNQTQNVDNSSQSGSFNHLEKDANDSQSGEESGAKGISSYRSSLHPITAPSPLSGLPEFSQLGWGHWFTLRDLELATNRFSKENVIGEGGYGIVYRGQLINGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGFRRSEEVLDPNIETRPSTSALKRSLLTALRCVDPDAEKRPRMSQVVRMLESEEYPISREDRRRRKSQAGNMEVETHSDTDKSDNADYKSNGRRK* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00321 498 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Lapu9g00321 498 CDD STKc_IRAK 188 454 - -
Lapu9g00321 498 Gene3D Phosphorylase Kinase; domain 1 162 257 - -
Lapu9g00321 498 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00321 498 MobiDBLite consensus disorder prediction 107 124 - -
Lapu9g00321 498 Gene3D Transferase(Phosphotransferase) domain 1 258 471 - -
Lapu9g00321 498 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00321 498 FunFam Putative receptor-like protein kinase 164 257 - -
Lapu9g00321 498 FunFam Putative receptor-like serine/threonine-protein kinase 258 469 - -
Lapu9g00321 498 MobiDBLite consensus disorder prediction 454 498 - -
Lapu9g00321 498 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00321 498 SUPERFAMILY Protein kinase-like (PK-like) 166 461 IPR011009 -
Lapu9g00321 498 MobiDBLite consensus disorder prediction 107 140 - -
Lapu9g00321 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Lapu9g00321 498 PANTHER OS01G0323000 PROTEIN 4 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00321 Lapu-Chr9 3251565 3256843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00321 17 456 Trihelix Transcription Factor Family AT1G70460 40.674 7.84e-96 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lapu9g00321 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00321 - - vum:124826827 934.48