Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00276 ATGTCCCCTGCCGCCGGAGCCGTCGCGTTGCACTCTTCGCTCTGCTCCTCCCCTTCTGAGAAACCCTATTCTCCTTTAAGATCAACCCTTCTTCAAGTGGCACCCAAACCCAAAAGTCTCCTCCAAAACCACCCACTTTACCCCCCTACCCATGCCAAACTCTCCCTTGAATTCAAGGAGAAAATTCTCTGCCTTGAGGTAATGGGTGTTGATGCAGGCAAAGCACTCTCCCAAAACCCTCATCTCCGCACAGCCACCATGGAATCAATTCACTCCATCATCACCTTTCTTTTATCCAATGGCATTCTGGAAAAGGACCTGCCCAGAATCTTCGGCATGTGCCCCAAGATTCTCACCGCTGACATCAAAACTGATCTAACCCCAGTTTTTGATTTCATCTTGAATGAACTCAAAGTTCCTGAACATAGCTTCAGGAGGGTGGTCAATAAGTGCCCGAGATTGCTTACATCCAGTGTGAAAGACCAGCTTAGGCCAGCTTTGGTTTATCTAAGGAGACTTGGATTCAAGGATCTGGGGGCCTTGGCTTATCAAGATTCTGTTCTCTTGGTGTCTAGTGTAGAACACACCCTCATCCCTAAACTTAAATTTTTGGAGACTTTGGGACTTTCCAAGGATGAGATCAGGAGTATGGTGTTGAGATGTCCAGCACTGCTCACTTTCAGTATAGAAAATAATTTTCAGCCAAAGTATGATTATTTTGCCCGGGAAATGAGGAGAAAATTGGAGGAGCTGAAAGTGTTTCCTCAGTACTTTGCTTTTAGTTTGGAGAACAGGATTAAACCTAGACACATGGAGGTCGTGCAGAGTGGGATCACTTTACCTTTGTCAGTGATGCTTAAAAGCAACGATGAAGAATTTAGGGAGCTGGTAAAGCAGGATGGTGGTTGA 909 0.4576 MSPAAGAVALHSSLCSSPSEKPYSPLRSTLLQVAPKPKSLLQNHPLYPPTHAKLSLEFKEKILCLEVMGVDAGKALSQNPHLRTATMESIHSIITFLLSNGILEKDLPRIFGMCPKILTADIKTDLTPVFDFILNELKVPEHSFRRVVNKCPRLLTSSVKDQLRPALVYLRRLGFKDLGALAYQDSVLLVSSVEHTLIPKLKFLETLGLSKDEIRSMVLRCPALLTFSIENNFQPKYDYFAREMRRKLEELKVFPQYFAFSLENRIKPRHMEVVQSGITLPLSVMLKSNDEEFRELVKQDGG* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00276 302 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Lapu9g00276 302 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Lapu9g00276 302 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Lapu9g00276 302 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Lapu9g00276 302 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Lapu9g00276 302 SMART mt_12 73 103 IPR003690 GO:0003690|GO:0006355
Lapu9g00276 302 PANTHER CGI-12 PROTEIN-RELATED 40 297 IPR003690 GO:0003690|GO:0006355
Lapu9g00276 302 Pfam mTERF 65 176 IPR003690 GO:0003690|GO:0006355
Lapu9g00276 302 Pfam mTERF 188 293 IPR003690 GO:0003690|GO:0006355
Lapu9g00276 302 FunFam Transcription termination factor MTEF1, chloroplastic 133 300 - -
Lapu9g00276 302 Gene3D Transcription termination factor 3, mitochondrial 133 299 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu9g00276 mTERF 3.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00276 K15032 - gmx:100788221 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00276 9 2721060 2721968 Lapu9g00276 9 2721060 2721968 ECH