Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00268 ATGTTGAAGGAGAAGGGAGGGAGCCGGCCCCCGTGGGTGGGGCTGGGCGCCGCCGTCTGGGTTCAGATCGCGGCGGGGAACACCGCCACCTTCCCTCTTTACTCCCACTCCTTGAAATCAGTGCTGGGCTTTGACCAGCGCCACGTCACGCTCCTCGGAGTGGCCATCGACATCGGTGAAAACCTCGGCCTCCTTCCCGGCATCGCCTGCAACAAGTTCCCCCCTTGGCTCATCCTCCTCGTTGGTTCCCTTGCCGCCTTCCTCGGCTACGCCGTCATCTTCCTCGCCGTCTCCCAGACCCTCCCCTCCCTCCATTTTTTGCTGCTATGGTTTGCTCTACTTGTTGCCGCTAACAGTACTGCGTGGTTAACCACTGCGGTTCTGGTGACCAACATGAGAAACTTCCCCGCTAGCAGAGGCTCTGTCGCTGGGATTCTGAAAGGTTATGGGGGTCTTAGTGGTGCTGTTTGGACTGGGATTTACAGCATTCTGCTTCATAACAATTCTTCTAAGTTCCTGTTGTTTCTTGCCCTTGGTATTCCTGCTATCTGCTTCAGTATGATGTTTCTCGTTAGGCCCTGTACTCCGGCCACTGGTGATGACCCTGCGGAGCCTTGCCATTTTCTGTTTGTCCAAAGTTCTAGTGTGATCATGGGTGTTTACCTTCTTGTTAGTACCATACTTGGTAATGTTTCTCCCTTTAGTGATGCTGTTTCCTATGCTCTGGTGACCGTGATGGTTCTGCTAATCATGGCTCCTCTTGCTGTCCCTTTGAAGATGACACTGTTTCCAAGGAATAGTTCTAAATCAGAGTCACCAGAGCAACCAGTTGGATCTTCTGAGTCTCTAATTCAAGGGAAAGATGAGAGTGCAGAGCCGCTGCTGGCATCTTCATCGGCGGGGGCACTTGGGAGTTTTAATGATCAGGATGATTCGTCTGAGGTTGCTGAGCTTCTTGCTTTGGGTGAGGGGGCTGTGAAGCAGAAGAAGAGAAGGCCTAAACGTGGAGAAGATTTTAAGTTAACTGAGGCTACAGTGAAGGCTGATTTCTGGCTGCTGTTTTTAGTCTTCTTTGTTGGCGTCGGCACTGGGGTTACTGTTCTCAATAATCTGGCCCAAATAGGTATTGCCCGAGGGGAGGAAGACACCACTACCTTACTGTCAATTTTCAGCTTTTGCAATTTTTTGGGGCGGCTAGGTGGAGGAGTTGTATCAGAACATTTTGTCAGGACAAAAGCACTTCCAAGGACTATTTGGATGACGTGCACGCAGACAATTATGCTCATTGTATACCTTCTGTTTGCCTATGCTGTCGCTGGAACCCTTTACCCAGCAGTTGCATTCCTTGGTGTCTGCTATGGCGTGCAAATGTCCGTGATGATCCCCACTGTTTCCGAACTTTTCGGTCTGAAGCACTTCGGTATACTGAGCAACGTCATGTTGTTGGGGAATCCAATTGGTGCAGTCCTCTTTTCAGTTCTGCTGGCAGGGAACATATATGACAACGAGGCAGCAAAGCAGCATGGTATAGGCCTTCTTGATTCTGGTGTTTCCTGCCTCGGTCCAAATTGCTTTAAGCTTACCTTTCTCATTCTTGCTGGGGTGTGTGTTGTTGGCATCATCTTGAGCGTTATCGTCACTTTGAGAATTAAGCCTGTTTACCGAATGCTTTATGCTGGAGGCTCTTTCAGGCTGCCTCAGACATCTTCAAGTCACTAA 1719 0.5009 MLKEKGGSRPPWVGLGAAVWVQIAAGNTATFPLYSHSLKSVLGFDQRHVTLLGVAIDIGENLGLLPGIACNKFPPWLILLVGSLAAFLGYAVIFLAVSQTLPSLHFLLLWFALLVAANSTAWLTTAVLVTNMRNFPASRGSVAGILKGYGGLSGAVWTGIYSILLHNNSSKFLLFLALGIPAICFSMMFLVRPCTPATGDDPAEPCHFLFVQSSSVIMGVYLLVSTILGNVSPFSDAVSYALVTVMVLLIMAPLAVPLKMTLFPRNSSKSESPEQPVGSSESLIQGKDESAEPLLASSSAGALGSFNDQDDSSEVAELLALGEGAVKQKKRRPKRGEDFKLTEATVKADFWLLFLVFFVGVGTGVTVLNNLAQIGIARGEEDTTTLLSIFSFCNFLGRLGGGVVSEHFVRTKALPRTIWMTCTQTIMLIVYLLFAYAVAGTLYPAVAFLGVCYGVQMSVMIPTVSELFGLKHFGILSNVMLLGNPIGAVLFSVLLAGNIYDNEAAKQHGIGLLDSGVSCLGPNCFKLTFLILAGVCVVGIILSVIVTLRIKPVYRMLYAGGSFRLPQTSSSH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00268 572 CDD MFS_Mch1p_like 10 540 - -
Lapu9g00268 572 Pfam Nodulin-like 11 258 IPR010658 -
Lapu9g00268 572 SUPERFAMILY MFS general substrate transporter 13 196 IPR036259 -
Lapu9g00268 572 Gene3D MFS general substrate transporter like domains 345 553 IPR036259 -
Lapu9g00268 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
Lapu9g00268 572 SUPERFAMILY MFS general substrate transporter 232 552 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00268 Lapu-Chr9 2621799 2626033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00268 2 572 Nodulin-like Gene Family AT1G80530 55.769 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00268 - - gmx:100794012 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00268 9 2621799 2626033 Lapu9g00268 9 2621799 2626033 ECH
Lapu3g00771 3 8144467 8149623 Lapu9g00268 9 2621799 2626033 PCT