Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu9g00265 | ATGGCGAGGCACTCTGGTGTTCCGTTTCTTGGATCAGAAGTTAGCTATAAGGTCAAAAAAACTGCTCTACTAACGTTTGAGACTGCCCTACAATGCATGAAGTCTGGACTGAATTTCCAGAATCCCCACTTCCACCTGCTTGAATTGAAACAAACAAGGGAAGCTGTTGTTGGATGGCGAAAACTTGGAAAAGAGCTTGATTTGAATCAATTTGCGGCCAACCCAACTCATACTTCAAATGCTGAATGTGATTCTTTATCAGTAGAATTAACATCTGTCCATGAACATGTGCAGGACCGTATTAGGCGCCTTATTGAAGCAGTACCTTCCGTAGCCAGGCAGCATCAAAGTCGGCCACCGGTTGGCTCTCAGATCCAAACAAGCAACACGACTGGAGAAACTGCAGTGGTGACTGGGGCTCAAGTTGAAGGAATGGAGCACCAGAGAGTTGAGGAAAGAAAAGATGGAAGTGAGAAAATGCGCATGATGAAAGGAGTGAAACTAATAGCTAAAGCATTGAAGGATGTGGAAATGAGCAGCGGTAAGAGAGAGGGAGGAACTGGAAATTTTTTTGATTGCAACATATGCCTGTGCCTAGCAAAAGATCCTGTGTTGACCTGCTGTGGTCACATGTTTTGCTGGCCATGCTTTTATAACTTGCCATATCTCTATGGAAATGCAAGGGAGTGCCCAGTTTGTGATGGAGAGGTCACTGAAACTAACATTACTCCAATTTATGGTAATGCGAGTGACTGTGACAATTCTGATGTAGCTTGTTCGATAGCTCCTCCTCGACCTGCTGCACCAAGAATGATCCGTTTTAGGTATTAG | 831 | 0.444 | MARHSGVPFLGSEVSYKVKKTALLTFETALQCMKSGLNFQNPHFHLLELKQTREAVVGWRKLGKELDLNQFAANPTHTSNAECDSLSVELTSVHEHVQDRIRRLIEAVPSVARQHQSRPPVGSQIQTSNTTGETAVVTGAQVEGMEHQRVEERKDGSEKMRMMKGVKLIAKALKDVEMSSGKREGGTGNFFDCNICLCLAKDPVLTCCGHMFCWPCFYNLPYLYGNARECPVCDGEVTETNITPIYGNASDCDNSDVACSIAPPRPAAPRMIRFRY* | 277 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu9g00265 | 276 | SUPERFAMILY | RING/U-box | 192 | 240 | - | - | |
Lapu9g00265 | 276 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 154 | 268 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Lapu9g00265 | 276 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 177 | 247 | IPR013083 | - | |
Lapu9g00265 | 276 | MobiDBLite | consensus disorder prediction | 116 | 132 | - | - | |
Lapu9g00265 | 276 | MobiDBLite | consensus disorder prediction | 139 | 158 | - | - | |
Lapu9g00265 | 276 | SMART | ring_2 | 193 | 233 | IPR001841 | - | |
Lapu9g00265 | 276 | MobiDBLite | consensus disorder prediction | 112 | 132 | - | - | |
Lapu9g00265 | 276 | Pfam | zinc-RING finger domain | 193 | 234 | IPR001841 | - | |
Lapu9g00265 | 276 | ProSiteProfiles | Zinc finger RING-type profile. | 193 | 234 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu9g00265 | Lapu-Chr9 | 2595659 | 2599664 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu9g00265 | 120 | 275 | C3H Transcription Factor Family | AT3G58030 | 37.975 | 4.31e-28 | 110 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu9g00265 | - | - | pvu:PHAVU_009G211500g | 269.626 |