Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00239 ATGGAGATTTTCAAATGCTTCTACATCAATCTTCTTGTTACCTTCATGTTATCATCAGCAGTTTTAGCTATTGACCCATATTCAGAAGCACTCCTCAGCCTAAAATATGAACTTGTAGATGATGATAACAGCTTGGGCAACTGGGTGGTGCCTTCAGGAGGAAAATTAACTGGGAAATCCTATGCGTGTTCTTGGTCAGGTGTCAACTGTAACAATGACTCATCCGTTGTAACTTCTATAGACCTTTCTATGAAGAAACTGGCTGGTGAATTGTCAGGGAAGCAATTCAGCATCTTCACAAACCTCACTAATCTCAACTTGAGCTACAATTTTTTCTCAGGGCAGCTTCCTGCGGAGATTTTCAACCTCACCAGCCTAACAAGCTTGGACATCAGCAGAAACAACTTTTCTGGTTCTTTCCCTGGTGGAATTAGTAGGCTCCAAAATTTGGTTGTACTTGATGCCTTTAGCAACAGTTTTTCAGGGCCATTGCCGGCTGAATTTTCACAACTAGCACACCTTAAAGTTCTAAATCTAGCTGGGAGCTACTTCAGAAGTTCAATTCCATCTGAATATGGTTCTTTCAAAAGCCTTCAGTTTCTTCATCTTGCAGGAAATTCTCTTTCAGGAAGTATACCTCCAGAACTGGGAAACCTCAAAACAGTGACCCATATGGAGATTGGCTACAACCTATACCAGAGTTTTATTCCACCCGAACTAGGTAACATGAGTCAGCTTCAGTATCTTGACATAGCAGGAGCAAATCTATCAGGTCATATACCAAAACAACTCTCCAATCTCACTAGTTTGCAATCACTTTTCCTGTTCAGAAACCAGCTCACAGGATCAGTGCCAAGTGAACTCAGTAACATCGAATCTCTGGCAGATTTAGATCTCTCTGATAACTTCCTCTCGGGGTCCATTCCCGAAAGCTTTTCAGCGCTAGAGAACCTAAGACTACTCAGTCTCATGTACAATGACATGGGTGGCACTGTTCCCGAAGGCATTGCGCAACTCCCATCCTTGGAAACTCTTCTCATTTGGAACAATCGCTTCTCTGGGTCACTTCCGCGTAGCTTAGGGAGGAACTCCAAACTCAAGTGGGTGGATGCTTCCACAAACAATTTAGTTGGCAGCATACCACCGGACATCTGTGTGAGTGGAGTACTATTTAAGCTAATACTGTTTTCAAACAAATTCACAGGCGATCTTTCATCAATATCCAATTGTTCTTCCCTCGTTCGCCTTCGCCTAGAAGATAATTCACTGTCAGGAGAAATCACTTTGAAATTCAGCCATCTTCCTGATATAGTATACATCGATCTCTCCAGGAACAACTTTGTTGGTGGCATTCCCTCAGATATTTCTCAAGCCACTCAACTGGAGTATTTTAATGTCTCTTATAATCTGCAATTAGGAGGTACCATCCCTGCACAAACATGGTCTTTGCCCCAACTTCAAAATTTTTCAGCATCTTCTTGTGGTATTTCTGGTGATCTTCCCCTATTTGAGTCCTGCAAATTAATTTCAGTTATTGATCTAGATAGCAATAACTTATCTGGAATCATCCCAAACAGTACTTCCAAATGTCGAGCTCTTGAGAAAATCAAACTATCCAACAATAATCTAACAGGCCATATACCTGATGAGCTTGCAAGTATTCCTGCTCTTGTAGTGGTGGACCTATCAAACAACAAGTTCAACGGTTTCATACCTGCTGAGTTTGGTAGTTGTTCAAGTTTACAACTTCTGAATGTGTCTTTCAACAATATCTCTGGTTCAATACCCACAGGAAAGTCATTCAAATTGATGGGAAAAAGTGCATTTATTGGAAATTCAGAGCTATGTGGAGAACCCCTCATATCATGTCCTGATTCAGATGGAATATTGGGCAGAAAAGGCACCTGGAAGATTACACATATTGTGCTACTCTCTGTAGGGTTGCTAATAGTTCTTCTGGGACTTACTTTTGGAATATTTTATTTGAGAAGGGGGATAAAAAGTCAATGGAAGATGGTCTCATACGTGGGTCTCCCTCAATTCACAGCAAATGATGTTTTGACGAGCCTCACTGCCACAAAACCAACAGAAGTTACATCACCATCACCAGCAGTTACAAAGGCTGTTCTGCCTACAGGAATAACAGTTTTGGTCAAGAAGATTGAATGGGAAGCGAGGAGCATGAAGGTTGTGTCAGAATTTATAATGAGACTGGGAAATTCAAGGCACAAGAATTTAATCAGACTACTGGGATTTTGCCACAACCAGCATTTAGTCTATCTTTTGTATGATTACTTGCCCAATGGGAATTTGGCTGAGAAAATGGAAATGGAATGGGAATGGGCAGCAAAATTCAGAACAGTGGTTGGAATTGCAAGGGGACTCTGCTTTCTTCACCATGAATGTTTCCCAGCAATACCACACGGAGACTTGAAGCCTAGCAACATTGTATTTGACGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAACAGGTTTTGAGGTTGAGCAAAGGCTCATCACCCACCATAACTAAGTGGGAAGCAGAATACGATGAGGCCACAAAAGAGGAACTGCGTATGGATATCTACAAATTTGGTGAGATGATTCTGGAAATTTTAAGTGGCGGAAGGTTGACAAATGCAGGAGCCAGCATACACAGCAAACCATGGGAAGATCTCTTGAGAGAAATTTATAATGAGAATGAAGCAAGCTCCGCAAGTTCATTGCAAGAGATTAAACTGGTTCTTGAGGTTGCAGTGTTTTGCACCAGAAGCAGGTCATCCGACCAGCCATCAATGGAAGATGTTCTCAAGCATCTATCAGGGCTAAAGCATATAGATGATGGCAGAACATCGAAAGAAGAGCAATAA 2877 0.4157 MEIFKCFYINLLVTFMLSSAVLAIDPYSEALLSLKYELVDDDNSLGNWVVPSGGKLTGKSYACSWSGVNCNNDSSVVTSIDLSMKKLAGELSGKQFSIFTNLTNLNLSYNFFSGQLPAEIFNLTSLTSLDISRNNFSGSFPGGISRLQNLVVLDAFSNSFSGPLPAEFSQLAHLKVLNLAGSYFRSSIPSEYGSFKSLQFLHLAGNSLSGSIPPELGNLKTVTHMEIGYNLYQSFIPPELGNMSQLQYLDIAGANLSGHIPKQLSNLTSLQSLFLFRNQLTGSVPSELSNIESLADLDLSDNFLSGSIPESFSALENLRLLSLMYNDMGGTVPEGIAQLPSLETLLIWNNRFSGSLPRSLGRNSKLKWVDASTNNLVGSIPPDICVSGVLFKLILFSNKFTGDLSSISNCSSLVRLRLEDNSLSGEITLKFSHLPDIVYIDLSRNNFVGGIPSDISQATQLEYFNVSYNLQLGGTIPAQTWSLPQLQNFSASSCGISGDLPLFESCKLISVIDLDSNNLSGIIPNSTSKCRALEKIKLSNNNLTGHIPDELASIPALVVVDLSNNKFNGFIPAEFGSCSSLQLLNVSFNNISGSIPTGKSFKLMGKSAFIGNSELCGEPLISCPDSDGILGRKGTWKITHIVLLSVGLLIVLLGLTFGIFYLRRGIKSQWKMVSYVGLPQFTANDVLTSLTATKPTEVTSPSPAVTKAVLPTGITVLVKKIEWEARSMKVVSEFIMRLGNSRHKNLIRLLGFCHNQHLVYLLYDYLPNGNLAEKMEMEWEWAAKFRTVVGIARGLCFLHHECFPAIPHGDLKPSNIVFDENMEPHLAEFGFKQVLRLSKGSSPTITKWEAEYDEATKEELRMDIYKFGEMILEILSGGRLTNAGASIHSKPWEDLLREIYNENEASSASSLQEIKLVLEVAVFCTRSRSSDQPSMEDVLKHLSGLKHIDDGRTSKEEQ* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00239 958 Gene3D Ribonuclease Inhibitor 27 181 IPR032675 -
Lapu9g00239 958 Gene3D Ribonuclease Inhibitor 182 278 IPR032675 -
Lapu9g00239 958 FunFam Leucine-rich repeat receptor-like protein kinase TDR 189 293 - -
Lapu9g00239 958 SUPERFAMILY RNI-like 79 402 - -
Lapu9g00239 958 Pfam Leucine Rich Repeat 297 315 IPR001611 GO:0005515
Lapu9g00239 958 Gene3D Ribonuclease Inhibitor 279 387 IPR032675 -
Lapu9g00239 958 Gene3D Transferase(Phosphotransferase) domain 1 764 958 - -
Lapu9g00239 958 Gene3D Ribonuclease Inhibitor 388 627 IPR032675 -
Lapu9g00239 958 Gene3D Phosphorylase Kinase; domain 1 700 763 - -
Lapu9g00239 958 FunFam Leucine-rich repeat receptor-like protein kinase TDR 681 765 - -
Lapu9g00239 958 SUPERFAMILY Protein kinase-like (PK-like) 705 943 IPR011009 -
Lapu9g00239 958 SMART LRR_typ_2 267 290 IPR003591 -
Lapu9g00239 958 SMART LRR_typ_2 339 363 IPR003591 -
Lapu9g00239 958 SMART LRR_typ_2 554 578 IPR003591 -
Lapu9g00239 958 SMART LRR_typ_2 195 219 IPR003591 -
Lapu9g00239 958 SMART LRR_typ_2 99 123 IPR003591 -
Lapu9g00239 958 FunFam Leucine-rich repeat receptor-like protein kinase TDR 766 950 - -
Lapu9g00239 958 FunFam Leucine-rich repeat receptor-like protein kinase TDR 312 625 - -
Lapu9g00239 958 PANTHER UNNAMED PRODUCT 173 881 - -
Lapu9g00239 958 FunFam Leucine-rich repeat receptor-like protein kinase 27 188 - -
Lapu9g00239 958 ProSiteProfiles Protein kinase domain profile. 670 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00239 958 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Lapu9g00239 958 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Lapu9g00239 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Lapu9g00239 958 SMART serkin_6 705 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00239 958 Pfam Protein kinase domain 705 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00239 958 SUPERFAMILY L domain-like 308 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00239 Lapu-Chr9 2349326 2353163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00239 7 943 Receptor kinase-like Gene Family AT5G51350 54.219 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu9g00239 Pkinase 3.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00239 - - gmx:100782323 1635.16