Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00231 ATGCAGCAGGCTGATTCAACGGTTCTAAGCTTGAGGCCTGGCGGTGGTCGTGGCGGCGGAAGCAAGCTTTTTGCTCTCTCCTCCTCCTCCTCCTCTTTCCCTACCTCCGCCGATCTTCCTCTCTCGCGCCCCCATGCGTCTTTCTCTCTCAAGAGTGGAGATTCACGGTTTGAGGTTCGTGAGCGTGTGCAATATACAAGAGATCAGCTTTTAACGCTTCAAGAGGCTGGTGAGTTTGAGGTCCCTGATGATATTCTGAAAATTAAGCAAGGCATCGAAGCTGAACTTTTTGGTGAAAATCAAAGTTGGAGCGGCCGTACTGACATCAATCTTCCTCATCAACTACAAAATCGGTATTCTGAGCCAGATAATCGTGATTGGCGAGGTCGTTCTGGACAATTTCCTGCTAGTCCAGATGACAGGTCTTGGGAAAACCTTAGAGATAATAACAGTAGTCAGGTTAATCGCCAAGACCATCTTAATTTCCAGTTTGCAAAGACACAAATCTCTTCGACCCAAGGGGGAGGACCTACTCCTACACTAGCAAAGGCTGAGGTTCCTTGGTCAGCCAGAAGGGGAAGTCTATCCGAAAAGGATCGTGTCTTAAAGACTGTGAAAGGAATACTGAATAAGTTAACTCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTAATTGATTCTGGCATTACCTCTGCTGACATCTTGAAGGATGTCATCTCACTTATTTTTGACAAGGCTATTCTAGAACCAACATTTTGCCCAATGTATGCTCAGCTGTGTTCTGATCTGAATGAAAAACTGCCTCCATTCCCGTCTGGGGAACCTGATGGGAAGGAAATCACCTTTAAGAGAGTATTGTTGAATAATTGCCAGGAGGCTTTTGAAGGTGTGGAACTAAAAAGGATGACTGCCCCTGAGCAGGAGATGGAGTCTATGGACAAGGAAAGGCTGCTCAAGCTTCGGACTCTTGGAAATATCCGTTTAATTGGTGAGCTATTGAAGCAGAAGATGGTTCCTGAAAAGATTGTACATCACATTGTTCAGGAGCTTTTAGAATCCCCAGACAGCAAGTCTTGTCCCATTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCCTAAATCGCGGCGTATAAATGATATTTACTTTAGTCGATTGAAAGAATTGAGCTCAAACCTACAACTTGCGCCCCGGCTTAGGTTCATGATTCGGGATGTTCTAGAGTTACGAGCTAGTAACTGGGTGCCTAGACGAGAAGAGATGAAAGCCAAAACCATTACTGAAATTCATTCAGAGGCAGAAAAGAATCTTGGTTTGCGACCAGGTGCCACTGCAAGTATGAGAAATACCCGTGGTGGTGTTCAAGGAAATTTCAGTCCTGGGGCCTTCCCTATTGCTCGACCTGGTACAGGGGGTTTGATGCCTGGAATGCCAGGTACCAGGAAGATGCCTGGAATGCCTGGATTTGATAATAACAACTGGGAGATGCCTAAGAGTAGATCTATGCCTAGAGGAGACTTCTCAGGTGTTCAAGCTGCTGGAGGCAGTAACAGTTTACTTTCCAAGTCCACAATCCTTAATTCGAAATTGCTACCTCAAGGGAGTAGTGGTGGTATCATAAGTGGAAAAAATAGTGCCCTAGTACATGGAGCTACTGGTACATTTTCTGCTCGCCCAGTAAACTTTGGTTTAGGTCCTGAGACAGCACCTCAGCTCTCTTCACATGATAAAACAGTTGCTCGTGTTCCTGTGTCCTCTGAGAAGCTACAAGCACCAGCAGGTGGATTGAATACTGTTGATCTTCGGCGCAGAACTGTCTCTCTTCTAGAAGAATATTTCAGTGTTCGGATTTTGGAAGAGGCATTACAGTGTGTGGAGGAATTAAAATCTCCTTCTTACCACCCTGAGGTTGTTAAGGAAGCCCTTTACCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTAGCCACTCTCATGGAGTATCTGTACATTAAGAAGATTCTTACTGCTGTAGATATTGAGGCCGGCTGTTTGTTATTTGCTTCTCTGCTGGATGATATTGGCATAGATTTACCTAAAGCACCTAGTAATTTTGGTGTGATAATTGGGAAACTAATTGTGGCTGGAGGGTTAGATTTTAAGGTGGTGAGAGAGATTCTCAAGAAGGTGGAGGATGACATGTTCCAGAGAGCAATATTTGACAGTGCGGTGGGGGCCATTAAATCTGCATCCGGACAAGCGGTGTTGGATTCACAAACATCTGATATTAAAGCTTGCCAGAATCTGCTCAAGTGA 2328 0.4472 MQQADSTVLSLRPGGGRGGGSKLFALSSSSSSFPTSADLPLSRPHASFSLKSGDSRFEVRERVQYTRDQLLTLQEAGEFEVPDDILKIKQGIEAELFGENQSWSGRTDINLPHQLQNRYSEPDNRDWRGRSGQFPASPDDRSWENLRDNNSSQVNRQDHLNFQFAKTQISSTQGGGPTPTLAKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAILEPTFCPMYAQLCSDLNEKLPPFPSGEPDGKEITFKRVLLNNCQEAFEGVELKRMTAPEQEMESMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLESPDSKSCPIEENVEAICQFFNTIGKQLDESPKSRRINDIYFSRLKELSSNLQLAPRLRFMIRDVLELRASNWVPRREEMKAKTITEIHSEAEKNLGLRPGATASMRNTRGGVQGNFSPGAFPIARPGTGGLMPGMPGTRKMPGMPGFDNNNWEMPKSRSMPRGDFSGVQAAGGSNSLLSKSTILNSKLLPQGSSGGIISGKNSALVHGATGTFSARPVNFGLGPETAPQLSSHDKTVARVPVSSEKLQAPAGGLNTVDLRRRTVSLLEEYFSVRILEEALQCVEELKSPSYHPEVVKEALYLALDKSPPCVEPVATLMEYLYIKKILTAVDIEAGCLLFASLLDDIGIDLPKAPSNFGVIIGKLIVAGGLDFKVVREILKKVEDDMFQRAIFDSAVGAIKSASGQAVLDSQTSDIKACQNLLK* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00231 775 Pfam MA3 domain 611 723 IPR003891 -
Lapu9g00231 775 MobiDBLite consensus disorder prediction 103 118 - -
Lapu9g00231 775 FunFam Eukaryotic translation initiation factor isoform 4G-2 193 424 - -
Lapu9g00231 775 SMART if4_15 202 423 IPR003890 GO:0003723|GO:0005515
Lapu9g00231 775 MobiDBLite consensus disorder prediction 103 152 - -
Lapu9g00231 775 ProSiteProfiles MI domain profile. 610 732 IPR003891 -
Lapu9g00231 775 Pfam MIF4G domain 202 423 IPR003890 GO:0003723|GO:0005515
Lapu9g00231 775 SUPERFAMILY ARM repeat 196 426 IPR016024 -
Lapu9g00231 775 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 47 768 IPR045208 GO:0003743
Lapu9g00231 775 SUPERFAMILY ARM repeat 606 748 IPR016024 -
Lapu9g00231 775 SMART ma3_7 611 723 IPR003891 -
Lapu9g00231 775 Gene3D - 606 771 - -
Lapu9g00231 775 Gene3D - 193 424 - -
Lapu9g00231 775 FunFam Eukaryotic translation initiation factor isoform 4G-2 605 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00231 Lapu-Chr9 2263118 2270171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00231 1 773 Eukaryotic Initiation Factors Gene Family AT5G57870 61.412 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00231 K03260 - gmx:100800438 1211.82