Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00207 ATGTTCTCAAATCGTGAATCAGCTCGCAGGTCCCGAATGCGGAAAAAGCAACAGATTGAGTCCCTTCAGTGTCACCTCGATCATCTACAGACACTGAATCACCAACTCTCTGAAAAGGTCATTTACTTGCTGGAATGTAACCAGCAAATCCTACAACTCAATGCGCAACTCAAAGACAAGGTTTCTTACCTTCAAGTTGCGGTCTCTGAGTTGTTCAGTCCTCTGGGGCATGTCGATCAGCATAACCACTTCCCCACTGGCTGA 264 0.4659 MFSNRESARRSRMRKKQQIESLQCHLDHLQTLNHQLSEKVIYLLECNQQILQLNAQLKDKVSYLQVAVSELFSPLGHVDQHNHFPTG* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00207 87 SUPERFAMILY Leucine zipper domain 1 52 IPR046347 GO:0003700|GO:0006355
Lapu9g00207 87 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 73 IPR044521 -
Lapu9g00207 87 Pfam bZIP transcription factor 2 53 IPR004827 GO:0003700|GO:0006355
Lapu9g00207 87 SMART brlzneu 3 56 IPR004827 GO:0003700|GO:0006355
Lapu9g00207 87 Coils Coil 19 39 - -
Lapu9g00207 87 CDD bZIP_plant_GBF1 1 45 IPR045314 GO:0003700|GO:0006355
Lapu9g00207 87 Gene3D - 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00207 Lapu-Chr9 2004772 2005546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00207 1 79 bZIP Transcription Factor Family AT5G60830 58.228 1.28e-23 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu9g00207 bZIP_1 2.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00207 - - pvu:PHAVU_009G204300g 155.992