Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00204 ATGAGCAACCCTGGAGATCAAATGGAGCAGTGTCAAAAGAAGAGGAAATCTATCATTTGTGAAGCCTCTAACTTTAGGACATCAAGGAGAAGATTCTGCAGCAACCAAAACGAAGAGGAGATGAACAAGGGAGTTTCAACAACATTGAAGCTTTACGATGACCCATGGAAGATCAAGAAGACTCTAACTGATAGTGATTTGGGAATCCTAAGTAGACTCTTGCTGGCTGCAGATTTGGTGAAGAAACAAATTTTGCCTATGTTGGGTGCAGATCATGCAAGAGCTGCAGAAACTGAAGAAGGGACCCCAGTTAGAGTTTGGGACATGGACACCAAATCCTTGCACCAACTCGTTCTAAAGCGATGGTCTTCTTCCAAGAGCTATGTTCTTATTGGAAAGTGGAACCAAGACTTCGTGAGAAGAAGAGATCTAAAGAAAGGTGATGAGATCGGATTTCATTGGGATCCATATAATTGCATTTTCAATTTCTGTGTTCTTAAACGAGCTATGCCAGAGAATTAG 522 0.4157 MSNPGDQMEQCQKKRKSIICEASNFRTSRRRFCSNQNEEEMNKGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGADHARAAETEEGTPVRVWDMDTKSLHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNCIFNFCVLKRAMPEN* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00204 173 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 31 168 - -
Lapu9g00204 173 Gene3D - 55 170 IPR015300 -
Lapu9g00204 173 SUPERFAMILY DNA-binding pseudobarrel domain 54 167 IPR015300 -
Lapu9g00204 173 CDD B3_DNA 56 167 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00204 Lapu-Chr9 1952490 1953011 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00204 58 153 RAV Transcription Factor Family AT1G50680 32.039 4.46e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00204 - - pvu:PHAVU_009G204600g 348.206