Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00192 ATGACATTGGGCACAGCTTATGCAAAAGCACGTTTCCTCGGAAGCGCTTCCACTTTCTCCAACTACAGGAAAAAGATTGCAGTGGCGAACCTATTCCAAAAGCACGGTTTCCCCGCTTCCCTCATCCCCTCCTTCATCTCCCGCAACCCTTCCCTTCTCCACTCCCCTCTCCCCCAACTCCACCATTCCCTCACCACCCTCTTCTCCCTCCGCATCCCCCAAAACGACCTCGTTTCCCTCCTCAATACCCACCCCTCCCTCCTCCACCACTCCTTCCACAAAACCCTCCAATCCCGTTTTCCACTTCTCCAAACGCGCTTCCCCACACTCTCCCCTTCCGCCCTCCTCAACCTCCTCCTCTCTTCCACCAAGCTCAACCTCGACCCCCTCCAACTCTCCCCCAAACTCAACGCGCTCAAAACCAATTTCGCCTTTTCCGACGCCACCCTGGACGGCGTTCTGGAAGGTTTCCCTGATGTGGTTGTCACGAGCGAGAACGAAATCGCGAGCGTGATAGATTTTCTCGTGGGGTTCGGACTCCCCCAGGACGAGATTGATCTCGTTGTCCGTTCGTTTCCTAGGGTTTTGGCGCTCGGTGTTGAGCACAGGCTGAGGCCGTTGTTTCGGGAGATCAAGGAGCTAGGGTTTTCCAATCGCGAGATGAGGAGAGAGATATCGCGGGACCCGAGGATTCTGGGGATGGAAATTGGAGAGTTTTCGCGGTGTTTGAGGCTGTTAGAGAGTTTAAAATGCAGGGAAAGTATTAAAGAGAGGGTTATGGGTTCGGGTCTGGTGAGAGCGTGTTTTGAAGTTAAATTAAGAGTGGATTGTTTGTGTGGGTATGGTTTGACTCGAAGGGATGCTCTGAAGATTATTTGGAAGGAGCCTAGGGTGATTTGTTACGAGGTTGCAGATATAGAGAGGAAGGTTGAGTTTCTTGTGCAGAGGATGAGGTGTGGTGTGGAGTGTTTGGCTGAGGTGCCTAAATACTTGGGTGTGAATTTTGAGAAGCAGATTGTGGCCAGGTACAGTGTGGTGGAGTGTTTGAGGGGGAAGGGTGCGATTGGGTTTGATGTTGGGTTGAAGGATTTGGTTGTGCCTTCTAGGCTTAGCTTCTATAATCTTTATGTGAAGCCATACCCGGAGTGTGAAAAGATCTATGGAAGGTTTTCTGGGTGTGGTGGTCAAGTTAAGACCAAGCATCCTGCTGGACTGTGGAAACTGTTTAAGCCGCAGAAGTTTGATGAAAGGGATGAAGATGTGAAGAACATGAGGGCCCTCATGGAGTCTCTGGTTTAG 1299 0.5119 MTLGTAYAKARFLGSASTFSNYRKKIAVANLFQKHGFPASLIPSFISRNPSLLHSPLPQLHHSLTTLFSLRIPQNDLVSLLNTHPSLLHHSFHKTLQSRFPLLQTRFPTLSPSALLNLLLSSTKLNLDPLQLSPKLNALKTNFAFSDATLDGVLEGFPDVVVTSENEIASVIDFLVGFGLPQDEIDLVVRSFPRVLALGVEHRLRPLFREIKELGFSNREMRREISRDPRILGMEIGEFSRCLRLLESLKCRESIKERVMGSGLVRACFEVKLRVDCLCGYGLTRRDALKIIWKEPRVICYEVADIERKVEFLVQRMRCGVECLAEVPKYLGVNFEKQIVARYSVVECLRGKGAIGFDVGLKDLVVPSRLSFYNLYVKPYPECEKIYGRFSGCGGQVKTKHPAGLWKLFKPQKFDERDEDVKNMRALMESLV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00192 432 SMART mt_12 222 252 IPR003690 GO:0003690|GO:0006355
Lapu9g00192 432 SMART mt_12 43 73 IPR003690 GO:0003690|GO:0006355
Lapu9g00192 432 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Lapu9g00192 432 SMART mt_12 321 355 IPR003690 GO:0003690|GO:0006355
Lapu9g00192 432 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Lapu9g00192 432 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Lapu9g00192 432 FunFam Transcription termination factor MTERF15 mitochondrial 165 387 - -
Lapu9g00192 432 Gene3D Transcription termination factor 3, mitochondrial 162 390 IPR038538 -
Lapu9g00192 432 PANTHER CGI-12 PROTEIN-RELATED 20 105 IPR003690 GO:0003690|GO:0006355
Lapu9g00192 432 Pfam mTERF 114 239 IPR003690 GO:0003690|GO:0006355
Lapu9g00192 432 Pfam mTERF 30 104 IPR003690 GO:0003690|GO:0006355
Lapu9g00192 432 Pfam mTERF 273 354 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu9g00192 mTERF 3.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00192 - - vum:124840038 644.81