Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00190 ATGTATAGTCAAGTGAATCGGGGTTCTCATTTCGGGCAGAGTCCTGTTCCTCCGGTGCTGCCGCCTCCACCACCACCGCCGCAGTATCAGCAGGCTCCGCCACATTTCCATCAGTTCCCACCACCTAACGTTGGTGGTCGTCCTCCACCACTGCCTAACATTGGTGGTCCACCGCCACCACCACCTCCTCCTCATGCTTATTTAAATGGACCTCCTCCTCCACCTCCTCCTCCGCCTCCTAATTCGTCTTCCTCAGTTCCCATGAGCCTTCCGGTTCAAGGTTCACTTAATGTGATGCCAAATGCAGGACAATCCTATGCTATCCCTTCTCAATTACACCATGGGAACAACATGGCGCCACAAGCATCTTGGGCTCCAGGGCCACCAAATAGAGTATTGCCACCACCACCACCTCCACCCCATCCTCCCCCGGCTTCCCAAGGTCAGATTTTGTATAACCCTCCTTTTCATCGTCCACCTCTGCAGCCCGGTGATGTTCAGAATCTGCATAATGCTCTTCCACCACCACCCCCTTCTGCAGGTTATTTCCATTCAACTGTTGGGAATTACCAAGTGCCTCCTGTTATTCCCCCACCGTTGCCGTCGTCTCCACCACCTGCTCTTCCGGCTCCGCCACCTGCTCTTCTGGCTCCACCACCACCTCCTCTTAATGCTCCGGTAACCTCTTCCTCATCAAATGCTGCACGCACTTATGACCATCACTCTGTGAAGGTTTCAGAATTAGAATCAAAGACTGTGGATTCGGTTGACGGAGTTGTAGCTTCTCTTCCATCTGGTATTGTACCTGTACATGGTTCTGATTCTAATTGGGATGGTCAATGTTGTGGAGAGGTTGCTGGTGCTGAAAAAGAAGAGGATCTTCCCCCACCTAAGCCAACGGAAGAAAATACTGTACTGAAGATAGAAGCTTTGTGTCAGCTTATTGCTGAGAAGGGTGCTGATATTGAAGATAAGATTCGTCGAGATGAATTTCAAAATCCTGAATATGTATTTTTGTTTGGTGGGGACCCGGGAACTGAGGCTGCAATTTCTAACGCTTATTTCCTGTGGAGGAAGAAGAAATATAATTTAGATACTGGATGGCATGAAAAGAAAAGGCAACCAGAGATAGTATACCCTTCAGGTGAGCAATATAACCTGCAGGTTGCAACAGCCAGTGCTGATTCTGACATGGAAATGGAAGATGATATCACACTTTCTGAAAAGGACCAAGGTTCAAACTATGCAACTGAAGCCCTAACTCAGCAATGTAATCGGGATGATGAAGTGTTTAGTGTGAATCAGAATATAGGGAAGCTGCAGAAATTATCAAAGAATGACCCTGCCAGAGACATCTCAGCCTGCAGTCCATCATACTTTGGTTCCATGGGAGTCAACGAACGGAATGAAGGACCAGAAATTTTATCTGATCTGGAGCACAGGAAATCTGTAAGACCACTTACCAAGGTTCGTAGTCTTGAGAATGACTCCACTGAAGTGGCTGAGTTACCCTCGGGCACAGCTTTGGAGAAAGCTGCAGCTTGTGTTGATAAAGATTTTGTATGTACTGGTACTTCTGATCTCAATGAAACCACTACTATCACTGATAGGGATCATGGGCCACTCCTAGCGAGTGGCAGCCCAATAAGACTTCTTCAAGATTATGCTTCTGATGACACTTCAGCTAATGAGGATGAAAGGAAAGCTGCAGATGCTAATGTTTTCACATTCTCAGGAGGTGCTGATACTGGTGTTTCAGTTGTCCATAAAGATTCTGGGAGTCATATGGAGATTGGAATTGGATCTAATAGTTTCGCCAGTAATCAAAAGGGGTTTGTGTTGCTCCCCAGAACATCACGGGATGATTCAGAAATATCTCCACATTTATTACAAGAGTCTAAGAAAACTCGCAACCGAAAAAAATCTGTCTCACGTTGGAGTAGTGATGGATGTATTGAGCATAACTCTGAAAATCAGATGTCTGTTAATTTTGCTGCTTCGATAGAAGCTTTCAAGGGCAAAGATAGATCAGAGGATACTGCCGTTGACAGTGGTAGTAAAAAAGGTAATGCTGAAAAGGAAGATGAAGGGAAAACCTCAAAATTTGAACCAAATGTTATGAAAGTTGATGAATTCGGAAGACAACTCAGAGAAAGTCTTTCAGATAGTGATTCTGATGATTCATGCCATCACTGGACAAGGAGGCTTAATAAAAGAGATAGAAGCTGGAGTCGCAGCCGGTCTCCTCCAGACAGGAGGAGTAGGAGGATTAGGAGGAGTCCCCTGAGGAGAAGAGATAAAAGAAACAGGTCTCGCAGCTGGTCACCCCGGCATCGAAGAAGCAGTAGGTCTCCAATCTCAAGACGTTCAGGTGACTTTCGTGGTGAGAACGTAAAAAAGGACAAGGATCAGTGTTTGGACTTTCTTCGAGGAAAGTGCTATCGAGGAGCATCTTGCAGGTACATTCACCATCAATCTGACATGAATGCTACTTCAAGGCGCTATAAGAATAAACGTGATCTGGAAGTCAGTTCTTCTGGAAAAAAATCTAAGACTAATGGAGACATGACAAATATTTCTTCTAAAGTGTTTGATAACGAGCATGATGGAGTTAGAAGTCAGGATGTGAACCTTTGCCTGAATGTGACTAGCCAGGAAGTAGTGCAGAAAAAAGAAGATTCAGGGAGGAATGTTGTTACATCAACTATCATTCATCTTGATGGTCAATCAGTGAATAGCAATCCAGGTAAATCTAAATGTATCAGAGAGGTTGCTCCTGAAATGCAGGAAAGCATTGTAGTTAGGGAGGATCCTAAGAATACAATCCAAGAGAATGATTGTTCAAAAGCAGGTGATTCTCAACAGCCACACCTAGTTGAAAGCTTTCACCATGATGCTTTAGCTTGTGATAATACTTCTAAATCATTTGCTACATATAAAGATGTCATTCCCTCAGGAGATGGTCTATTTGTTCAGAAAATGCAACACAGTGTTTCTTCTGTTGGAATTCCAGAAGATTCTGGTTACCCATCTCAGCATGTAAATGCATCCTTTGTGAGTGATACATCACCTGATAAAAGATCAATTGTTTCTGCTAGTGTTAATGAAGTTCCTGGTAGGGTCATATCGGAGCAGGCTTCATTGCACCCTCAGGCTTCACAAGAGTTGCCTCCGCAGTGTAGCTCTTCAGTGGAATTACCGCATCATAATTACCAGTTGACTGCATCTGTTGTTTCACATTCCCCTGGTGAAAATCCTGTGCATATGCCACAAATTTCAAGGCAGTATGATGCGATGCAGCAAAGTGCATTCTTTCCTTTCCAATCCACTACCAGAGAAAAGTTTGAACCTTACCCAGCTCCTTTACGCATGCAGAATCCTCACTTCAATGTACCACCTAATAGCACTTGGACATCCTTGCCACTGCCACCGCCACCGTCAAGAGTGGTTTATGATGCTAGTTTAAACTCAGGAGTTGTAAAATCATATATTTCTTCTGAAGTCATTCAGAATCAATTGCATTCAAGAACCGACTTTGTTTCTCAGACTTCCATGAAGTCTTTACCAACTTGCTCTCCGAATTCTGAATTTCAGGATGTAGTATATCCTCCAATGCAGGATCATTCACGAACTTTCATGCTTACTGAACCTTTCTCTCCAAAGCAACTTCCTCAAGGGAACCCAGCTAGTCAATTGCTTTCAGGATCTAGTCTCAATAGAGATGAATTTCATAATCAACTTCCAATGCAGGATTCAAAATTTTCCAGTACCACTTCATTTGGCAGCCTTCAGCCTCAACCGAATCAATTTTCCTGGAAATTGGATGTGAATAGACTACAACCTTCTCTGGGTGGCAAGTTACCCCCCGAAGGACATTTTATGACATCCTCGCACATTGATTCATTGTCACAGAAGCAACAATCAATATATAATTTTCAGTGTCCTGTATCTGAGGCTAACAAGGGTGTGCCTGGGGAGACTGCTAGTGTTTCCAGATATCCACCTGATTTTCTGGATAGCAATAATTCGACTCCTCTTCCACCGTTTGGTGGATCAAGAATATCTGCACACTATAATCCTTATGCATCAACCTTTGAGAAACCGCTAAGTTCCAAATTCAGTTCAAGTATTTTTAGACAAGAAAATGAAATGATCCATGGTAACAATTATGCTTCTTCTAGATTGAGCCATACTACTGTAAATGGGGAGGGTGATGGTGGGGTTGGATCAAGACATTCAGCATCTGCATCAAAATCAGGTAGAGCTCTTGGTCAGATTTTTCCTAGGTCTGGTGGTGACCAATATGATCCACTTTTTGACAGCATTGAACCATCATCGTCGTTGAGAAGAACTGATTTTGATCAGAAGCAGGAAGTTACAGGTGAATCCAACGTCAGCCTAAGGCCCAAAAGTTCTTACATGTCTTTGGATGTGGATGAGAAAAACAAGCAGGAGGAGGTTGGGGCTGTTGCCTCTACCACTTCTCAAAATCATGATGAATATGGTGAGACAGCAGATGCAGAAGTTGGTGATATTGAAAATGAGAGCCCGAGTGATGATGTGGATGTTGCAAAATCGCCTACTGAGGAGGTTGAGATTAATCAGGTCAAATCTCCGGGGAAAAGAAAAAAGAGTAAGGATTCCAGATCGATGAAATTATTCAAAGTTTCCATTGCGAACTTTGTAAAGGAGGTTTTGAAGCCATCATGGCGGCAAGGTAATATGAGTAAGGTTGCTTTCAAAACCATTGTGAAAAAGACTGTGGATAAAGTGTCGGGAGCCATGAAAGGCCATCGTGTACCTAAGTCCCAAGCAAAGATAAGTCAATATATTGATTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTACGTTGACAAGTATGTGAAGGTATGA 4899 0.4348 MYSQVNRGSHFGQSPVPPVLPPPPPPPQYQQAPPHFHQFPPPNVGGRPPPLPNIGGPPPPPPPPHAYLNGPPPPPPPPPPNSSSSVPMSLPVQGSLNVMPNAGQSYAIPSQLHHGNNMAPQASWAPGPPNRVLPPPPPPPHPPPASQGQILYNPPFHRPPLQPGDVQNLHNALPPPPPSAGYFHSTVGNYQVPPVIPPPLPSSPPPALPAPPPALLAPPPPPLNAPVTSSSSNAARTYDHHSVKVSELESKTVDSVDGVVASLPSGIVPVHGSDSNWDGQCCGEVAGAEKEEDLPPPKPTEENTVLKIEALCQLIAEKGADIEDKIRRDEFQNPEYVFLFGGDPGTEAAISNAYFLWRKKKYNLDTGWHEKKRQPEIVYPSGEQYNLQVATASADSDMEMEDDITLSEKDQGSNYATEALTQQCNRDDEVFSVNQNIGKLQKLSKNDPARDISACSPSYFGSMGVNERNEGPEILSDLEHRKSVRPLTKVRSLENDSTEVAELPSGTALEKAAACVDKDFVCTGTSDLNETTTITDRDHGPLLASGSPIRLLQDYASDDTSANEDERKAADANVFTFSGGADTGVSVVHKDSGSHMEIGIGSNSFASNQKGFVLLPRTSRDDSEISPHLLQESKKTRNRKKSVSRWSSDGCIEHNSENQMSVNFAASIEAFKGKDRSEDTAVDSGSKKGNAEKEDEGKTSKFEPNVMKVDEFGRQLRESLSDSDSDDSCHHWTRRLNKRDRSWSRSRSPPDRRSRRIRRSPLRRRDKRNRSRSWSPRHRRSSRSPISRRSGDFRGENVKKDKDQCLDFLRGKCYRGASCRYIHHQSDMNATSRRYKNKRDLEVSSSGKKSKTNGDMTNISSKVFDNEHDGVRSQDVNLCLNVTSQEVVQKKEDSGRNVVTSTIIHLDGQSVNSNPGKSKCIREVAPEMQESIVVREDPKNTIQENDCSKAGDSQQPHLVESFHHDALACDNTSKSFATYKDVIPSGDGLFVQKMQHSVSSVGIPEDSGYPSQHVNASFVSDTSPDKRSIVSASVNEVPGRVISEQASLHPQASQELPPQCSSSVELPHHNYQLTASVVSHSPGENPVHMPQISRQYDAMQQSAFFPFQSTTREKFEPYPAPLRMQNPHFNVPPNSTWTSLPLPPPPSRVVYDASLNSGVVKSYISSEVIQNQLHSRTDFVSQTSMKSLPTCSPNSEFQDVVYPPMQDHSRTFMLTEPFSPKQLPQGNPASQLLSGSSLNRDEFHNQLPMQDSKFSSTTSFGSLQPQPNQFSWKLDVNRLQPSLGGKLPPEGHFMTSSHIDSLSQKQQSIYNFQCPVSEANKGVPGETASVSRYPPDFLDSNNSTPLPPFGGSRISAHYNPYASTFEKPLSSKFSSSIFRQENEMIHGNNYASSRLSHTTVNGEGDGGVGSRHSASASKSGRALGQIFPRSGGDQYDPLFDSIEPSSSLRRTDFDQKQEVTGESNVSLRPKSSYMSLDVDEKNKQEEVGAVASTTSQNHDEYGETADAEVGDIENESPSDDVDVAKSPTEEVEINQVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKV* 1633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 127 149 - -
Lapu9g00190 1632 Gene3D - 798 879 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 738 797 - -
Lapu9g00190 1632 SUPERFAMILY Surp module (SWAP domain) 295 361 IPR035967 GO:0003723|GO:0006396
Lapu9g00190 1632 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 321 1631 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 1395 1549 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 829 857 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 673 708 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 1 237 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 751 784 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 86 118 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 15 85 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 621 647 - -
Lapu9g00190 1632 Gene3D Surp module 283 365 IPR035967 GO:0003723|GO:0006396
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 829 846 - -
Lapu9g00190 1632 ProSiteProfiles Zinc finger C3H1-type profile. 799 826 IPR000571 GO:0046872
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 192 226 - -
Lapu9g00190 1632 MobiDBLite consensus disorder prediction 617 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00190 Lapu-Chr9 1800273 1811906 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lapu9g00190 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00190 - - vum:124822814 2341.61