Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00187 ATGATGATGGCGAGTTCAACAGAAGGTCAACAAGCCAAGCAAGAAGGTGGCCCCATTAATGACAAGTTCTCCAAGGCATCGTCCAGTACAAGACAATGGTCAGCGTTCAGAAATCCAAGAATTGTGAGAGTGTCACGTTCTTTTGGAGGAAAAGATAGGCACAGCAAAGTTTGCACCATAAGAGGGTTGAGGGACAGGAGGATTAGGCTCTCAGTGCCCACAGCAATTCAGCTATATGATCTTCAAGACAAGCTTGGGCTAAACCAACCAAGCAAAGTGATAGATTGGTTGCTTGAAGCAACTAAATTGGACATTGACAAGCTCCCTCCACTTCACTTCCCTCAGGGTTTTGCTCAATTTCATCATCCACAAACTCTACTTCCCTTTCACGATTCAAGTACCTCTCAGCTTTCTCTCGGACCCTTCTGTGATGCTAGCTCAACATTTGTTAGGGATGGGGGGCTTCAAAACGTCATGGCAAAGTCAAGGTATTGGGATAGTATAGATTCAATATCAAGATTAAAAGGCAAGGAAGTTGAAAAGGGCAAGTGGGTCAAAACAAATGAGCAAGAAAACAATGAAGATGATGTTGTTGGAAGCTACAGCAACTTGCATGCTTCTACTCAGAGGCTTTTCCCTATGGGTAGTGGTACCACCACCACTCACTCCCTTTTACCTGGTTTGTTAAACAATACCATGCCATATAACCCCTACAATGCTGAGCCTTCTAATTTGTCGTTATCCCAATTTGGAGGCCATGGCTTGTTTCCTTCCCAGCAGGCAGATCCCGGTCCAAGCAGTGGAAATGGTGTGCAATTCCCATCTTCTTTGCCATTGCCTTCATCTGGCTCTCAATTTTTCTTTGGTTCATCTTCTGCCACACCAGCAATGTTTACTCCCTATGCTCCATTTATTACACCCTCAGTAGAAAACGATCCTAGACAGTTTAACCACATTCAGTTCTTGAACTCAGGTTCTCAAGTCTTGCCTCATCCTCTCATTCCATCTCTTCACTCGTTCAATTCACACGTCAGACCCTTCCCAGCAGCACCCTTTAGTTCAAAGCTTTTGGAGTCAGATAGCATCCGCAGTCAACCTGAGAAGGGTAGCACTTCTTGA 1119 0.4477 MMMASSTEGQQAKQEGGPINDKFSKASSSTRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVIDWLLEATKLDIDKLPPLHFPQGFAQFHHPQTLLPFHDSSTSQLSLGPFCDASSTFVRDGGLQNVMAKSRYWDSIDSISRLKGKEVEKGKWVKTNEQENNEDDVVGSYSNLHASTQRLFPMGSGTTTTHSLLPGLLNNTMPYNPYNAEPSNLSLSQFGGHGLFPSQQADPGPSSGNGVQFPSSLPLPSSGSQFFFGSSSATPAMFTPYAPFITPSVENDPRQFNHIQFLNSGSQVLPHPLIPSLHSFNSHVRPFPAAPFSSKLLESDSIRSQPEKGSTS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00187 372 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 280 IPR005333 GO:0003700
Lapu9g00187 372 MobiDBLite consensus disorder prediction 249 275 - -
Lapu9g00187 372 Pfam TCP family transcription factor 50 166 IPR017887 -
Lapu9g00187 372 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Lapu9g00187 372 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00187 Lapu-Chr9 1758325 1760476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00187 34 308 TCP Transcription Factor Family AT5G60970 42.705 5.47e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu9g00187 TCP 2.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00187 - - gmx:100788984 582.408