Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00170 ATGCAATCTCCAACTTCAGATACGTTTCCCTCTCACTATGGGAATGAACCAATTTCCTATTATGACCCAGCATTTTACTACACCAGGCCCTTTTCCTTTGACTCTGAAAGCAACCCAACATCAAAACAAGAAAGCAACCATGACCTTCCTCCTTTGTCCTTTTTCCACTTTCCCTCTCCTCCCTTTGAAGACACTCAAATTTTCCTCGAACAACACCACGAATTCCTCCTTCAGTTTCCCCATAAACCTCTACCTCAAGATCCCCAGCCTCAACCAGTTAATACTGCCATGGAGACTCCTGCTAAAAAGAGTAATCAGATCCCCATAAAAAGACCCGGCGGCAAGCGAGATAGGCACAGCAAGATCAACACCGCAAGAGGACTGAGGGATAGGAGAATGAGACTTTCCCTTGATGTTGCAAAGAGGTTTTTCGGCTTGCAAGATATGCTAGGCTTTGACAAAGCTAGCAAGACCGTGGAGTGGTTACTGAACCAAGCAAAAGTTGAAATCAACCGTCTAGCGAAGGAGAAAAAGAAGCAGAAGAAGAATGTTCACCACAGTTGTAGCGGTGCTAGTTCGGAATGTGAAGAAGGTGTGTCTAGTCTTGACGAGGTTGTAATGAGTAGAGATCAAGAACAACCAGGAGAAGAGAGAGTGAACAAAGTGTTGAAGAGAAGGGTTAAGCATTCTAGGAAGACCAGTGCATTCCATCCTCTTGCAAAGGAGTGCAGGGAAAGGGCAAGAGAGAGGGCAAGAGAGAGGACAAGAGAAAAAATGAGAAGTCGTGGCCTAGCTAAAGAATCAAAGCCATGGAGAGAGGGAACAAATCAAAATCTGAACCAATTGGGTTACTGGAACCCCTCGGAAACTGGAGAAGAATTTGGTACCAAGAGCCATAGTTTGCCTCCTTCCTTGGACGTGATCACTGAGGGTAAAGAACATAGCTACCACGCAAAGGAGCATGATGATGATTCTTTGGTTATTTTGAGCAAATGGAGCCCCTCCTTGATCTTCAATAACTATGGATTCTCTCAAGAACACCAATTTGCAGAATTTCAGTCCTTGGGAAAACCGTGGGAGGCCTAG 1086 0.4503 MQSPTSDTFPSHYGNEPISYYDPAFYYTRPFSFDSESNPTSKQESNHDLPPLSFFHFPSPPFEDTQIFLEQHHEFLLQFPHKPLPQDPQPQPVNTAMETPAKKSNQIPIKRPGGKRDRHSKINTARGLRDRRMRLSLDVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEINRLAKEKKKQKKNVHHSCSGASSECEEGVSSLDEVVMSRDQEQPGEERVNKVLKRRVKHSRKTSAFHPLAKECRERARERARERTREKMRSRGLAKESKPWREGTNQNLNQLGYWNPSETGEEFGTKSHSLPPSLDVITEGKEHSYHAKEHDDDSLVILSKWSPSLIFNNYGFSQEHQFAEFQSLGKPWEA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00170 361 ProSiteProfiles R domain profile. 241 258 IPR017888 -
Lapu9g00170 361 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 93 359 IPR005333 GO:0003700
Lapu9g00170 361 MobiDBLite consensus disorder prediction 244 269 - -
Lapu9g00170 361 MobiDBLite consensus disorder prediction 244 278 - -
Lapu9g00170 361 MobiDBLite consensus disorder prediction 91 120 - -
Lapu9g00170 361 Pfam TCP family transcription factor 114 261 IPR017887 -
Lapu9g00170 361 Coils Coil 163 183 - -
Lapu9g00170 361 ProSiteProfiles TCP domain profile. 115 173 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00170 Lapu-Chr9 1582430 1584648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00170 48 255 TCP Transcription Factor Family AT3G18550 40.598 4.45e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu9g00170 TCP 3.8e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00170 - - pvu:PHAVU_009G200600g 553.903