Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00166 ATGGCTCCTCCATGGCTTCAAGAGCTCCATCTCCGTCCCTTGAGCATTCCTGTAACCATTGATAGGATGTTTTCTGTCATGCCATCAAGGCCTATTCCTGTTAAACCAGGTGACAGTTTATACCTTTCCAATCTGGATGACATGATTGGAGCTCGTGTTTTTACCCCTACAGTGTATTTTTATCAATTAGACAACACGAGTTCTTCCCAAAAACCTGTCACAAAAATACTACAATGTGCTCTCGCTGATGTCTTAGTGCCTTATTACCCCTTCTCAGGCAGGCTCAGAGAGACCGGGAATGGTAAACTAGAAGTGTTTTTTGGACCAGAGCAAGGGGCACTCATTGTTGAGGCACGATCTGATATTGCCTTAACTGAGTTAGGAGACCTCACAGCTCCAAACCCGGCTTGGGAACCTTTGATCTTCAAGTTTCCCAATGAAGAACAGTACAAGGTCCTTGAAATGCCACTAGTCATTGCTCAGGTTACCCTTTTCCGCTGTGGTGGCTTTAGCCTTGGTTTGAGGCTATGCCATTGCATCTGTGATGGCATGGGAGCTATGCAGTTCCTAGGTGCATGGGCTGCCACTGCAAGAACGGGGATGCTGGTTATAGATCCTGTGCCCTGTTGGGATAGAGAAATGTTTAGGCCACGCGACCCTCCAGTGGTTAAATTTCCTCACTTGGAGTTTATGAGAATTGAAGAAGGCTCCAACCTCACAATGACACTATGGCAAACCAAGCCGGTTCAGAAGTGTTACAGGATCAAGCGCGAGTTCCAGAATCGCGTGAAAGCTCTAGCTCAGCCATATGATGCTGCAGGTTGCACCACTTTTGATGCCATGGCAGCTCATATTTGGAGATCCTGGGTGAAAGCTCTTGATGTAAGGCCACTAGATTACCAGCTTAGGTTAACATTTTCAGTCAATGCTCGGCACAAGCTTAGAAACCCACCACTGAAAGAAGGGTTTTATGGCAATGTGGTGTGTGTTGCATGCACAACAAGCACTGTCTCTGAGCTTGTGCATGGACAGCTCCCAGAGACAACCCTTTTGGTTAGAGAGGCAAGACAGTGTGTCTCAGAGGAGTATTTGAGATCCACAGTGGATTATGTTGAAGTGGATAGGCCAAGGCAACTTGAGTTTGGTGGTAAACTAACCATAACTCAATGGACTAGGTTCTCAATATACAAGTGTGCAGATTTTGGGTGGGGTAGGCCACTCTATGCTGGTCCTATAGATTTAACACCAACCCCTCAAGTTTGTGTGTTTCTACCTGAAGGAGAGGCTGATTGTAGTGATGGTTCTATGATTGTGTGCATATGCTTGCCTGAGTCTGCTGCTCAAAAGTTTACGCAAGCTTTGTTGCTCCATTCAGATTTTTGA 1383 0.4613 MAPPWLQELHLRPLSIPVTIDRMFSVMPSRPIPVKPGDSLYLSNLDDMIGARVFTPTVYFYQLDNTSSSQKPVTKILQCALADVLVPYYPFSGRLRETGNGKLEVFFGPEQGALIVEARSDIALTELGDLTAPNPAWEPLIFKFPNEEQYKVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGMGAMQFLGAWAATARTGMLVIDPVPCWDREMFRPRDPPVVKFPHLEFMRIEEGSNLTMTLWQTKPVQKCYRIKREFQNRVKALAQPYDAAGCTTFDAMAAHIWRSWVKALDVRPLDYQLRLTFSVNARHKLRNPPLKEGFYGNVVCVACTTSTVSELVHGQLPETTLLVREARQCVSEEYLRSTVDYVEVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEADCSDGSMIVCICLPESAAQKFTQALLLHSDF* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00166 460 Gene3D - 15 232 IPR023213 -
Lapu9g00166 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 450 - -
Lapu9g00166 460 Pfam Transferase family 17 452 - -
Lapu9g00166 460 Gene3D - 238 454 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00166 Lapu-Chr9 1552809 1554193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00166 30 455 Monolignol Biosynthesis Gene Families AT5G48930 31.306 5.95e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00166 K15400 - gmx:100802814 860.907