Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00158 ATGGCATCTCAAGCAGAACTTAGCATGGATTACAAGCCCTACAGCTATTCCACACTGCTGAAATCATTTGCAGACCAAACTGATGATCAAACCTACAAGCTCGAAGAGTTTCTTTCTCGCTTAGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAACTCCTCACCAACGCTGTGGAGGCTTCAAGGCAGCAACTACAGGCCTCCAGATCAAACCAAGGCACAAGGCCAATTCTGGAAGAATTCATACCCATAAAGCATCCTAACTCTCAAGAAAGCACTGAGAAGGCATCAAACATATCAGACAAGGCGAATTGGATGACATCGGCTCAATTATGGAGCCAAGCAAGCGAAGGAACCAAACCAAAATCCACAATTATATCACCAAAAGAAGGTGCTGATTCAGGGTTTAGCGTGAGCCCTAAGCTAGCCCTAGACAACAAACATAGGAATGGGGGTGCCTTTTTACCATTCTCAAAAGAACGAAACTCATGCCAAGTAAAAGGGGGTCTTCCTGAGTTAGCCCTTGCCTCTTCTGAGAATAAAATGGTGGAGAAGAAATGTGAAGAGGCAGAAAAATGTTCCAAAAGGGAGAATTCAGGCACAAGAGGGAGTTGTGAAGGGATTGTTGATCAGGGAAAAAGTGCTGCAATTGCAACTGAGGCACAAACAATAAATACAACAACCACCACAACTAACACTACTGGCCAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCGGACTTGCACCGTCGATTTGTGAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCCACTCCGAAACAGATTAGGGAGTTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCACACTAGAAGACCCAGCCCAAGCCTACATCCAGGAGCACCAACACCACAACTAGTAGTCCTTGGAGGAATTTGGGTGCCACCGGAATATGCCACCGCTGCCGCACACTCCGGTGGTCCCACCCTCTATGGCCCACATCCTACCTCACATGTGCCGCCACCACACTACTGTGCAGCCACCCCCGTGTCCCAAGAGTTCTACAACTCAGCTCCATCACTATCGTTGCCATCAACACACGACCACACTCTCCACCACCACCATTTTCACATGTACAAGACAGCACCACAGACCCAAAGCCCTCCAGAATCAGATGTTCGGAGCGGTGGCGACAGATCTGAGAGCATTGAGGATGGGAAGTCGGACAGTGGCAGCTGGAAAGGAGAGAGTGGGGAGAAGAAAGGGTTGGCAGCACTAAGAGATCAAGAAGGGGAAGACAGCACTGGGAGTGCGATAACTCTAAGATTCTAG 1374 0.4818 MASQAELSMDYKPYSYSTLLKSFADQTDDQTYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAVEASRQQLQASRSNQGTRPILEEFIPIKHPNSQESTEKASNISDKANWMTSAQLWSQASEGTKPKSTIISPKEGADSGFSVSPKLALDNKHRNGGAFLPFSKERNSCQVKGGLPELALASSENKMVEKKCEEAEKCSKRENSGTRGSCEGIVDQGKSAAIATEAQTINTTTTTTNTTGQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSLHPGAPTPQLVVLGGIWVPPEYATAAAHSGGPTLYGPHPTSHVPPPHYCAATPVSQEFYNSAPSLSLPSTHDHTLHHHHFHMYKTAPQTQSPPESDVRSGGDRSESIEDGKSDSGSWKGESGEKKGLAALRDQEGEDSTGSAITLRF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00158 457 NCBIfam myb-like DNA-binding domain, SHAQKYF class 248 303 IPR006447 GO:0003677
Lapu9g00158 457 MobiDBLite consensus disorder prediction 408 442 - -
Lapu9g00158 457 FunFam Myb family transcription factor 247 305 - -
Lapu9g00158 457 Pfam Myb-like DNA-binding domain 250 301 IPR001005 -
Lapu9g00158 457 MobiDBLite consensus disorder prediction 394 457 - -
Lapu9g00158 457 SUPERFAMILY Homeodomain-like 245 306 IPR009057 -
Lapu9g00158 457 Gene3D - 247 305 - -
Lapu9g00158 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 305 IPR017930 -
Lapu9g00158 457 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 428 IPR044787 GO:0003700|GO:0006355
Lapu9g00158 457 Coils Coil 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00158 Lapu-Chr9 1484083 1487137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00158 1 457 G2-like Transcription Factor Family AT2G03500 51.738 1.38e-127 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu9g00158 Myb_DNA-binding 9.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00158 - - gmx:100815048 725.317