Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00157 ATGAAGGATCCAGTGGAGCACCAAGTGAAGTCTAGAAGGTCTCTTCCCAAACCCACAGAACGTAGAAGAAGGTGCAGGAGAAGGAGCCAGTGCAAGCCAGAGAAATTACAAGAAACAGAACTTGATGTTGCTTCCTCTGCCACTTGCAAGAGTCTTGTGTTTCATCAAAGGCCTGGTTATGGCCAACTTGGGACAAAGTGTGTCGTCAAAGCTAACCACTTCCTTGCAGATATATCAGTATCTGACTTGAGCCATTACAACGTTAAAATAACACCTGAAGTCACTTCTCGAAAAACAAGCAAGGCTATCATAGCAGAGTTGGTGAGGGTTCACAGGAACACTGACTTAGCCACGAGGCTCCCTGTGTATGATGGTGGAAGAAACCTTTACACTGCTGGTTTGCTTCCTTTTACATACAAAGAATTCAATGTAACATTGAGTGAGGATGATGATGCCACTAGTGGTACCAGGGAAAGAGAGTTTAAGGTGGTAATCAAGTTTGCAACTCATGTCAGCATGCATCAACTACGCGAGCTTCTAAGTGGAAAGCAAGTGGACAATCCACAGGAAGCTCTAACCGTCTTTGATATTGTGTTAAGGGAGCTTGCGGCTCAGAGTTACGTGTCGATTGGGAGGTTTCTTTATTCTCCTGATGTAAGAAAACCACAGCAGTTGGGTGGTGGCCTTGAATCGTGGAGGGGCTTCTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCACTTAACATTGATATGTCATCAATGGCTTTTATTGAACCACTACCTGTGATTGACTTTGTTGCTCAAATTTTGGGAAAAGATGTGCACTCAAAACCATTGTCGGATGCGGATCGTGTCAAGATAAAAAAGGCCCTAAGAGGTGTAAAAGTTGAAGTTACACATCGAGGAAATTTTCGAAGGAAGTATAGAATATCAGGATTGACTTCACAGCCTACAAGAGAGCTGATTTTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTATTTTCAAGAAATGTATGGATTTACAATTAAATATTCTCATCTACCTTGCCTTCAAGTGGGAAGCCAAAGGAAGGTGAACTATTTGCCCATGGAGGCATGCAAAATAGTTGAGGGCCAGAGATATACAAAAGGACTAAATGAAAAGCAGATAACTTCTCTGCTGAAGTTCTCATGCCAGAGACCCCGTGAACAAGAGGCCGACATTTTACAGACAATGCAACAAAACAATTACGACAATAATCCATATGCAAAAGAGTTTGGCATCAGCATAGACAACAAGCTTGCATCCGTTGAGGCTCGGGTTCTTCCACCTCCTTGGTTGAAATATCACGACACTGGAAGAGAGAAAGAATACTTGCCACAAGTGGGTCAGTGGAACATGATGAACAAGAAAGTAATAAATGGAAGTACTGTAAGATATTGGGCATGTATCAATTTCTCTCGAAGTGTGCAGGAAAGTACAGCTCGTGGATTTTGCCAACAGTTAGTTCAGATGTGTCAAATCTCAGGCATGGAATTCAGTCAGGACCCTGTGATTCCTATATATTCAGCAAGACCAGATCAGGTAAAGAAATCTTTGAATTATGTACATTCTGCTGCTATAGATAAGCTTGGTGGGAAAGAGCTAGAGTTGCTGATTGCCATTCTTCCAGACAATAACGGCTCTCTGTATGGTGATCTCAAAAGAATTTGCGAAACAGATCTGGGGTTGATTTCTCAATGCTGCCTTACAAAACATGTATTCAAGGTCAATAGACAATACCTAGCAAATGTGGCACTAAAAGTCAACGTCAAGATGGGAGGAAGAAACACTGTACTTTTGGATGCTTTAAGTTGGAGGATTCCACTGGTTAGTGATATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAATCAGGAGAGGATTCTTGTCCATCCATTGCTGCTGTTGTAGCCTCCCAGGACTGGCCTGAAGTAACAAAGTATGCAGGTTTGGTTTGTGCTCAGCCTCATCGAGAAGAACTTATTCAAGATCTTTTCAGATCTTGGCAAGATCCACAGAGGGGTGTAGTTTATGGTGGTATGATCAGGGAGCTTTTACTATCATTTAAGAAGGCAACGGGACAAAAACCATTGAGAATAATCTTTTACAGGGATGGGGTAAGTGAAGGACAGTTCTACCAGGTTTTGCTATACGAACTTGATGCCATCCGCAAGGCTTGTGCATCTTTGGAACCTAGTTACCAACCACCAGTAACATTTGTAGTTGTTCAAAAACGGCATCACACTAGACTCTTTGCAAACAATCACGATGACAGAAATAGTACTGATAAGAGTGGGAATATCTTACCTGGTACTGTTGTAGATTCTAAGATCTGTCATCCTTCTGAATTCGACTTCTACTTATGCAGTCATGCGGGAATTCAGGGTACAAGTAGACCAGCACACTATCACGTCCTCTGGGACGAGAACAATTTCTCTGCAGATGAGATTCAGTCTCTTACCAACAACTTATGCTACACTTATGCAAGATGTACGAGGTCTGTTTCTGTAGTGCCTCCAGCATACTATGCTCATTTAGCAGCCTACAGGGCTCGATTCTACATGGAACCTGATGTTGTTGAGATTACTAAACTGCGAGGTACAAGATCGAAAGAGGGGCCAGTTCGGCCACTGCCTGCTCTGAAAGAGAAGGTGAAAAATGTTATGTTTTACTGTTGA 2721 0.423 MKDPVEHQVKSRRSLPKPTERRRRCRRRSQCKPEKLQETELDVASSATCKSLVFHQRPGYGQLGTKCVVKANHFLADISVSDLSHYNVKITPEVTSRKTSKAIIAELVRVHRNTDLATRLPVYDGGRNLYTAGLLPFTYKEFNVTLSEDDDATSGTREREFKVVIKFATHVSMHQLRELLSGKQVDNPQEALTVFDIVLRELAAQSYVSIGRFLYSPDVRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGFTIKYSHLPCLQVGSQRKVNYLPMEACKIVEGQRYTKGLNEKQITSLLKFSCQRPREQEADILQTMQQNNYDNNPYAKEFGISIDNKLASVEARVLPPPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVIPIYSARPDQVKKSLNYVHSAAIDKLGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKVNRQYLANVALKVNVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFRSWQDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFANNHDDRNSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVVEITKLRGTRSKEGPVRPLPALKEKVKNVMFYC* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00157 906 Pfam Piwi domain 550 869 IPR003165 GO:0003676
Lapu9g00157 906 MobiDBLite consensus disorder prediction 1 15 - -
Lapu9g00157 906 ProSiteProfiles Piwi domain profile. 549 870 IPR003165 GO:0003676
Lapu9g00157 906 SMART PAZ_2_a_3 265 397 IPR003100 GO:0005515
Lapu9g00157 906 Pfam Mid domain of argonaute 458 535 IPR032473 -
Lapu9g00157 906 CDD PAZ_argonaute_like 260 374 - -
Lapu9g00157 906 CDD Piwi_ago-like 419 869 IPR045246 -
Lapu9g00157 906 FunFam Argonaute 10 439 612 - -
Lapu9g00157 906 ProSiteProfiles PAZ domain profile. 261 375 IPR003100 GO:0005515
Lapu9g00157 906 Pfam Argonaute linker 1 domain 209 258 IPR014811 -
Lapu9g00157 906 Gene3D - 439 612 - -
Lapu9g00157 906 SMART Piwi_a_2 549 870 IPR003165 GO:0003676
Lapu9g00157 906 MobiDBLite consensus disorder prediction 16 30 - -
Lapu9g00157 906 Pfam Argonaute linker 2 domain 403 447 IPR032472 -
Lapu9g00157 906 Gene3D paz domain 255 379 - -
Lapu9g00157 906 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 53 870 - -
Lapu9g00157 906 FunFam Protein argonaute-2 254 380 - -
Lapu9g00157 906 SMART DUF1785_2 208 260 IPR014811 -
Lapu9g00157 906 Pfam N-terminal domain of argonaute 65 199 IPR032474 -
Lapu9g00157 906 MobiDBLite consensus disorder prediction 1 31 - -
Lapu9g00157 906 SUPERFAMILY Ribonuclease H-like 538 871 IPR012337 -
Lapu9g00157 906 Pfam PAZ domain 265 391 IPR003100 GO:0005515
Lapu9g00157 906 Gene3D - 618 906 IPR036397 GO:0003676
Lapu9g00157 906 SUPERFAMILY PAZ domain 256 416 IPR036085 GO:0005515
Lapu9g00157 906 FunFam protein argonaute 10-like 618 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00157 Lapu-Chr9 1457361 1472447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00157 54 906 Eukaryotic Initiation Factors Gene Family AT5G43810 74.564 0.0 1395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00157 K11593 - gmx:100810235 1721.83