Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00150 ATGGACGGAAGGAGAGATAATATAATCGCTGCTATCTCAGTGACTACACTGGTTATTCTCATAATTATTGCTCGTGTCACGTTGAAGCTCTCAAAGGCCTTCTTCCTCATTTTTGGTGCTGGGGTTGCTGTCATTCTTGCAGTGTTCGCTTATGTACTCCTCAGCATGAGTTACAACCGCAGGAGGAGGCTACTGGAGTCACGGTTGAAATCTGAAAGCCAAGAAGAACTTCGCATAGAATACAGTTTCTTGAAGAAAGTTGCGGGGGTTCCCATCAAGTTCAGATACAAGGAGCTTGAGGAAGCCACTGATGGGTTTCAGGCACTGATTGGAAAAGGTGCTTCTGCTTCAGTTTTCAAAGGTATTCTCAATGATGGCACTTCAGTTGCCGTGAAACGAATCGATGAAGAGGAGAGAGGGGAGAAGGAGTTCAGATCAGAGGTTGCAGCAATAGCTAGTGTGCATCATGTGAACCTTGTGAGGCTACTGGGCTACTATAATGCTCCAACAGCACCTAGATACCTTGTTTATGAATATGTCTCAAATGGGTCTTTGGATTGTTGGATTTTTCCCAAAAGGTTACCTCAGAGGCGCCGTGGTGGATGCCTGTCGTGGAATTTGAGGTACAAAGTTGCTATTGATGTTGCCAAGGGACTTGCTTATCTTCATCATGATTGCAGGTCAAGGATCTTGCACCTTGACGTAAAGCCAGAAAATATACTGTTGGATGAAAATTATAGAGCACTTGTTTCAGATTTTGGTTTGGCGAAGCTTGTTGGCAAGGATGAAAGTCAAAAAGTTGTGTCTGCTATTAGAGGAACAAGAGGGTACTTGGCACCTGAGTGGCTCTTAGAGCAGGGTATTTCCGACAAGACTGACATATATAGTTATGGGATGGTTCTCTTGGAGATGGTGGGAGGCAGGAAAAACGTGTGCTTGGTGGAAGATGAAAAGGCCAAGTCCAAAAGAAAATGGCAGTATTTTCCAAAGATAGTGAATGAGAAAGTGAGGGAAGGTAAATTCATGGAAATTGTTGATCATAGGTTGTTGGAAGGTGGGGGTGTTGATGAGAGGCAGTTAAGGACACTGGTTTATGTTGCTTTGTGGTGTGTGCAAGAGAAGCCACGATCGAGACCTAGCATGGCCCAAGTTGTGGATATGCTTGAAGGGCGTGTGAGGGTAGAACTGCCACCTGATAGCAGAATGATTCTTGTTGATTTTCTGTGTGTGGATGACAGTGCAACAGATAGTAGCAGCATGTCAAGGTTGAACTTTGTGTCGAATCAAAGAACACAAAGCAATTTGGAGTGTTCATCTACCTACTCGTTTGCTACAACTGTTTTGTCAGGACGATAG 1356 0.4425 MDGRRDNIIAAISVTTLVILIIIARVTLKLSKAFFLIFGAGVAVILAVFAYVLLSMSYNRRRRLLESRLKSESQEELRIEYSFLKKVAGVPIKFRYKELEEATDGFQALIGKGASASVFKGILNDGTSVAVKRIDEEERGEKEFRSEVAAIASVHHVNLVRLLGYYNAPTAPRYLVYEYVSNGSLDCWIFPKRLPQRRRGGCLSWNLRYKVAIDVAKGLAYLHHDCRSRILHLDVKPENILLDENYRALVSDFGLAKLVGKDESQKVVSAIRGTRGYLAPEWLLEQGISDKTDIYSYGMVLLEMVGGRKNVCLVEDEKAKSKRKWQYFPKIVNEKVREGKFMEIVDHRLLEGGGVDERQLRTLVYVALWCVQEKPRSRPSMAQVVDMLEGRVRVELPPDSRMILVDFLCVDDSATDSSSMSRLNFVSNQRTQSNLECSSTYSFATTVLSGR* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00150 451 Gene3D Phosphorylase Kinase; domain 1 65 179 - -
Lapu9g00150 451 PANTHER OS07G0415500 PROTEIN 32 400 - -
Lapu9g00150 451 SUPERFAMILY Protein kinase-like (PK-like) 86 389 IPR011009 -
Lapu9g00150 451 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00150 451 Gene3D Transferase(Phosphotransferase) domain 1 180 396 - -
Lapu9g00150 451 Pfam Protein kinase domain 109 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00150 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Lapu9g00150 451 FunFam Putative receptor-like protein kinase 180 396 - -
Lapu9g00150 451 ProSiteProfiles Protein kinase domain profile. 104 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00150 451 ProSitePatterns Protein kinases ATP-binding region signature. 110 132 IPR017441 GO:0005524
Lapu9g00150 451 FunFam Putative receptor-like protein kinase 71 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00150 Lapu-Chr9 1380584 1381939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00150 1 400 Receptor kinase-like Gene Family AT5G20050 63.772 4.44e-173 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu9g00150 Pkinase 6.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00150 - - vra:106757544 775.778