Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00147 ATGTCTTCCATGGCCTCCACGACCAGGGACGAATCCTCCGACAACGACAGCAACTGCTCCTCGTTAACCGCACCGGACTCCTCCCGCAGCTGGCTCAGCACCTTTAGCTTCCGCCGCGCTAACCACAGCTCCCTCTCCCTCTCCACCGCCGAGACCACCGCCAGGGCAGCATGCGAGGCCATGCGCCGCCTCCGCCTCCACACAGGCGCCGTCGGCCTCGACCACTTCCGCCTTCTGCGGCGGCTCGGCAGCGGCGACATCGGGAACGTGTACCTCTGCCAGATACGGAACCCGGTGGTGGGGTTGGCGCAGTGCCTCTACGCCATGAAGGTGGTGGATAGAGAGGCGCTGGCCATACGGAAGAAGCTGCACCGAGCGGAGATGGAGAAGGAAATTCTGGCCATGATGGATCACCCCTTCTTGCCTACTCTATACGCTGCGTTTGATGCCTCTCATTACTCTTGTTTCGTTATGGACTTTTGCCCCGGCGGAGACTTGTTCTCCGCTCGCCAACGCCACCCTGGGAAACGCTTTACCATCTCCTCCGCTAAGTTTTATGCAGCGGAGACACTTGTGGCACTAGAGTATCTGCACATGAAGGGCATAGTATACAGGGATTTGAAGCCTGAGAATGTGCTGGTAAGGGAGGACGGGCACATTATGCTTTCGGATTTTGATCTGTGTCTGAGATGCGACGTGGTTCCAAAGCTGTTGAGAAGCAAAACCAGATCAGATCGCAGCGTCAAGACTCGAACATCTTCTTGTGCTGCCCCCATGCAATCCTGTTTCTCTGCCTCAAGCAAGAAAAAGGTGACAACGGTTATAAGGGAAAATGTGGAGGTGTGTGAACTTGACACAGAGGTGGTGGCAGAGCCCATCAATGCTAGGTCCAAGTCATTTGTGGGAACCCATGAGTACTTGGCACCAGAAGTGATTTCTGGTCAAGGACATGGTAGTGCAGTGGATTGGTGGACTTTTGGAGTTTTCTTGTACGAAATGTTATATGGGAGAACGCCCTTCAAAGGTGAGAACAATGAGAAGACACTCACCAACATTCTGAAGCAGCCCTTGTCTTTCCCTAGAATTGCAGTGAGTAGCAGCAAGGAGTTTGAAGAGATGGTGAAGGTTCAAGACCTCGTCAGCAAGCTATTGGTGAAGAACCCAAAGAAGAGAATTGGGTGCTGCATGGGCTCAGTTGAGATCAAGAGGCATGAGTTCTTCAAGGGAGTGAACTGGGCTCTAATTAGATCAGTTAGGCCACCTGAGTTCCCTGATGATTTGAACAAGATTAGAAGTAGAGTTTTGTTACAGAAACTAAGCAAGAAAGACAAGGATCAACCGTTTCATATTACTCATCATTTTGACTACTTCTGA 1374 0.5189 MSSMASTTRDESSDNDSNCSSLTAPDSSRSWLSTFSFRRANHSSLSLSTAETTARAACEAMRRLRLHTGAVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLAQCLYAMKVVDREALAIRKKLHRAEMEKEILAMMDHPFLPTLYAAFDASHYSCFVMDFCPGGDLFSARQRHPGKRFTISSAKFYAAETLVALEYLHMKGIVYRDLKPENVLVREDGHIMLSDFDLCLRCDVVPKLLRSKTRSDRSVKTRTSSCAAPMQSCFSASSKKKVTTVIRENVEVCELDTEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLTNILKQPLSFPRIAVSSSKEFEEMVKVQDLVSKLLVKNPKKRIGCCMGSVEIKRHEFFKGVNWALIRSVRPPEFPDDLNKIRSRVLLQKLSKKDKDQPFHITHHFDYF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00147 457 MobiDBLite consensus disorder prediction 1 28 - -
Lapu9g00147 457 SMART serkin_6 76 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00147 457 Pfam Protein kinase domain 297 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00147 457 Pfam Protein kinase domain 77 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00147 457 ProSiteProfiles Protein kinase domain profile. 76 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00147 457 Gene3D Transferase(Phosphotransferase) domain 1 294 422 - -
Lapu9g00147 457 SUPERFAMILY Protein kinase-like (PK-like) 62 425 IPR011009 -
Lapu9g00147 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lapu9g00147 457 FunFam serine/threonine-protein kinase D6PK-like 295 425 - -
Lapu9g00147 457 FunFam protein kinase PINOID 161 229 - -
Lapu9g00147 457 PANTHER FLIPPASE KINASE 1-RELATED 14 427 - -
Lapu9g00147 457 Gene3D Transferase(Phosphotransferase) domain 1 161 230 - -
Lapu9g00147 457 FunFam protein kinase PINOID 2 74 160 - -
Lapu9g00147 457 CDD STKc_phototropin_like 74 425 - -
Lapu9g00147 457 Gene3D Phosphorylase Kinase; domain 1 74 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00147 Lapu-Chr9 1354536 1356322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00147 14 457 AGC Kinase Gene Family AT2G26700 55.385 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu9g00147 Pkinase 8.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00147 K08286 - gmx:100787216 741.11