Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00143 ATGAGTGACCCCAATCCCATTGTTATAGGAAGAAAGGAAGTTGTGGAAGAGGAGGAATCGGCGTTGGCGTTGCCTCTGCTTGGAAGCAGAGAGAGAGATGATGGGTCAGGATCAGGGTCGAAGTCAAAGGCATCGGTTAGTGGTTCTGTGTTCAATTTATCTACAACAATCATCGGTGCTGGGATCATGGCCTTACCTGCGGCCATGAAAGTTGTGGGTGTGAGTGTGGGTGTTGCTGCAATCATCTTCCTCGCCTTCCTCACGCACACCTCTCTCGAGATTCTGCTTAGATTCAGCAGAGTTGCCAAGGCTTCCACCTACGCCCACCTCATGGGGGATGCTTTTGGGAGTTCTGGAGCCCTTCTCTTTCACCTATCAGTGCTTCTCAACAACTTTGGGATACTTGTTGTTTACGTCATCATAATTGGTGATGTCTTGTCTGGAACATCTTCTAGTGGAGTCCATCATTTTGGGGTGTTCGAAGGCTGGTTTGGTCAGTGCTTCTGGACTGCCCGTACTTTTGTTCTGCTTCTCACAACTCTCTTCGTATTTGTTCCATTGGGCTTCTTTAAGAGGATAGATTCATTGAGACATACTTCTGCCTTAGCAGTAGCTCTGGCCATTGTGTTTCTACTCATAACTGCGGGAATCACGTTCTTCAAATTGTTTAATGGCAGTATAGCCAGTCCCAGGATGCTTCCTAATATTACTGATGTTACATCCATATGGAATCTCTTTACAGCAGTTCCAGTTCTAGTGACAGCATTTGTTTGTCACTACAATGTGCATACAATCGAAAATGAATTAGGAGACCCTTCCTTGATGCAACCAGTTATACGTGCATCACTGGTTCTGTGTTCTAGTATTTATATTCTTACAGCATTATTTGGATTTCTCCTATTTGGTGAGTCAACACTTGATGATGTGCTAGCCAACTTTGATACTGATCTGGGTATCCCCTATAGCAGTCTACTCAATGACATTATTCGTATCAGCTACGCCCTTCACCTTATGCTTGTTTTCCCAGTTATCTTCTTCTCACTGCGCTTCAATTTTTACGATCTCATCTTTCCTTCAGCTAGGTCCTTGGATTCAGATAATCGTAGGTTTGTCTTGATTACCATTGGACTCATCACTTTAATCTATGTGGCTGCAATTTTTTTACCTAGCATCTGGGATGTATTTCAATTCACTGGAGCTACTGCCACCGTTTGCCTTGGATTTATTTTCCCTGCTGCAATTTCTATTAGGGATCCCCATGGCATTGCAACAAAGAAGGACAAGATTTTATCCATCGTCATGATTTTTCTTGCTGTGTTCTCAAACGTTGTGGCTATATACAGTAACGCTGATGCTTTGAGAAAACATGTGGATCCTCACCAGTGA 1386 0.4358 MSDPNPIVIGRKEVVEEEESALALPLLGSRERDDGSGSGSKSKASVSGSVFNLSTTIIGAGIMALPAAMKVVGVSVGVAAIIFLAFLTHTSLEILLRFSRVAKASTYAHLMGDAFGSSGALLFHLSVLLNNFGILVVYVIIIGDVLSGTSSSGVHHFGVFEGWFGQCFWTARTFVLLLTTLFVFVPLGFFKRIDSLRHTSALAVALAIVFLLITAGITFFKLFNGSIASPRMLPNITDVTSIWNLFTAVPVLVTAFVCHYNVHTIENELGDPSLMQPVIRASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDIIRISYALHLMLVFPVIFFSLRFNFYDLIFPSARSLDSDNRRFVLITIGLITLIYVAAIFLPSIWDVFQFTGATATVCLGFIFPAAISIRDPHGIATKKDKILSIVMIFLAVFSNVVAIYSNADALRKHVDPHQ* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00143 461 Pfam Transmembrane amino acid transporter protein 43 448 IPR013057 -
Lapu9g00143 461 PANTHER AMINO ACID TRANSPORTER 38 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00143 Lapu-Chr9 1299442 1304510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00143 22 461 Amino Acid or Auxin Permease AAAP Family AT3G30390 60.909 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00143 K14207 - gmx:100778699 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00143 9 1299442 1304510 Lapu9g00143 9 1299442 1304510 ECH