Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00137 ATGTTTAGCTCCCAAAGCTTCAAACTCCTTTTTCTCTATTCCAAGGGACTCACCACCACCAAACGAAATATTCCTTTTCCTTCACTTCTCTCTTTGAGACATTTCTCCCTCACTTCACAACAACACTCGTTCACCGTTTCCTATCTCCTCAACACCTGTGGCTTCTCACCACAAACCGCTCTCAGGGCTTCTCATACCATTCGCTTGGATAACCCTCAAAAGCCCGACTCATTCATCGCTTTCTTCACCAACAATGGATTCACCCACGCTCAGATCAACGACATCGTCAAAAGGGTACCCAACATTCTCGCTTGCAACAACCCCCACAAGACGCTTTTGCCAAAGTTCCAATTTTTACTCTCAAAGGGTGCTTCACCTTCTGATATCGTTCGCCTCGTTAATATATGCCCCAGAATCCTCGGATGCAGCCTCAAGAACAACGTGATCCCCTCCTTTGAATTGGTGAGAAGGTTCCTCAAATCTGATAAGAAAACCATTGATTGTGTTTTCACTAATAAACCTTTCCTCCAATATAGCGTTGGAGCGCAGAATGTGAACATGTTGCTTGATGTTGGACTCAAGGAGTCCAGCATCGGCTATTTGTTCGGAAGGAGGCCTTCTATACTCTTGTCTACTAACTTGAGGGAGGCAATTGATGAAGTTAAGGAAATGGGGTTCGACCCTTCCAAGATTACCTTCGCGATTGCCTTGCACGCCAAAGTGGTTGTGTCAAAATCGCGGTGGGACGCGAAAGTTGATGCCTTTAAGATGTGGGGTTGGTCTGAGGAAATGGTTCTTGATTCGTTCAGGAAGCATCCGCTCTTAATGTTGGCGTCCAAAGATAAAATTAATGAGGTCAATCGATTTTGGGTTGAATTAGGCTGGGACCCTTTGGTACTTGCCAAAATTCCCAAGATTTTTGGATTTAGTTTGGAGAGAAGGATTGTTCCGAGGGGTTTGGTTGTCCGGTATTTGATCGTGAAGGGTCTGAGAGAGAAGAGTGCCAACTTGTCTACCGCGTTTGATATTTCCGAAGAGTTGTTTCTTAAAAGGTATGTGATGCATTTTAAGGAGGAAGTGCGGCAACTGTTAAAGCTTTATCAGGAAAAAATAAGTTTCCAAATAAACAGGGAGGATGGTGTCGAATCTGCCAGTTAG 1158 0.4447 MFSSQSFKLLFLYSKGLTTTKRNIPFPSLLSLRHFSLTSQQHSFTVSYLLNTCGFSPQTALRASHTIRLDNPQKPDSFIAFFTNNGFTHAQINDIVKRVPNILACNNPHKTLLPKFQFLLSKGASPSDIVRLVNICPRILGCSLKNNVIPSFELVRRFLKSDKKTIDCVFTNKPFLQYSVGAQNVNMLLDVGLKESSIGYLFGRRPSILLSTNLREAIDEVKEMGFDPSKITFAIALHAKVVVSKSRWDAKVDAFKMWGWSEEMVLDSFRKHPLLMLASKDKINEVNRFWVELGWDPLVLAKIPKIFGFSLERRIVPRGLVVRYLIVKGLREKSANLSTAFDISEELFLKRYVMHFKEEVRQLLKLYQEKISFQINREDGVESAS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00137 385 FunFam Mitochondrial transcription termination factor-like 144 360 - -
Lapu9g00137 385 Pfam mTERF 183 348 IPR003690 GO:0003690|GO:0006355
Lapu9g00137 385 Pfam mTERF 80 177 IPR003690 GO:0003690|GO:0006355
Lapu9g00137 385 SMART mt_12 93 125 IPR003690 GO:0003690|GO:0006355
Lapu9g00137 385 SMART mt_12 266 296 IPR003690 GO:0003690|GO:0006355
Lapu9g00137 385 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Lapu9g00137 385 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Lapu9g00137 385 SMART mt_12 199 227 IPR003690 GO:0003690|GO:0006355
Lapu9g00137 385 PANTHER CGI-12 PROTEIN-RELATED 40 359 IPR003690 GO:0003690|GO:0006355
Lapu9g00137 385 Gene3D Transcription termination factor 3, mitochondrial 161 366 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00137 Lapu-Chr9 1223472 1227522 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu9g00137 mTERF 1.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00137 K15032 - gmx:100792944 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00251 3 2629790 2631292 Lapu9g00137 9 1223472 1227522 PCT