Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00128 ATGGATTTCTTAAACCAGGAGATAAGCATGCATAGCCCTGATGGTGAACTTAAAATAAGTTTTGGCTATCAATGCAATAGTGATAGAGGTATAGCTTACAATGAAATCAAGAGAACGAGCAGTTTCTCTTGCTTGTCCGGTGCTGCCTTAAGTGCAAATGCTACGCTTGCCAACACCAATATCTGCAATGGCGTAATAGGGGAAGAAATCCTTCCGAGTTTGGACTCTCCTAAATCGTTTCGCACGGTACCTTCTTCATCAAGTTTTCCAAAGTTGGACATATTATCATCTTCTGTCAATAGTAGTTTTTCAAATCTAAGTTGCAGCCCATCCACTCCAAGTAACATGCTTGAACATGACCCTTGTACATTAAAATCTATGAGTGCTCCTTCCAGAACTGAAGGTTTTCTTAATGCCATGGATGTTCAAGTTGCTGGAGGAGCGGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTCAATGGGAGAGATGCAGCTGACTTTTTGGCTGGTACCCTTTACGACTCCATTGTATCTTATTTTAATATGTTAAATTGGGATTTGGAACCAGATTCCATAAAAGCATCTGATCATGTGGCTGTGGGTGAATCCTTTCCCTATAATTTGGATGACAGTCTTATTCTTCAGGAGCATCAATCTCCTTCGAAATTTAAGGGAAGCAATTCTGGTCTTGACATTACTTCACCTTCCAAGTCAGAAGCAGCTTCTAAATCGTTTTCACATAGTACAATACTTGATGGTCTCCAGCATGTTCTTAGTCAGGTTGAGAATGATTTCTTATGCATGGTTGAGCAGGAAATGGAAGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGCAATGATTTATACACACTTAATCTTGGCGACAGCGGAGCAGTATTAGCGACAAGCTGTACAGGTAGCACAATGAATGGGAATGAGAGATTGAAGGCTATCCAGCTCACAGATAGTCATACTGTTGACAATGAAGCTGAAAGAATTCGAGTTCTTTCTGATCATCCTGATGATCCTAAAACCATAGTAGCAGGGAAAGTGAAGGGAAAACTGAAGGTTACTCGAGCTTTAGGAGTAGGGTACTTGAAAAAGAAAATTCTGAATGATGCATTAATGGGAATCCTTCAAGTTCATGATCTCAAAAGCCCGCCATATATTTCAACCGATCCTTCATTGAATGTGCACAAAATCTCAGATTCTGACCAATTTGTTATAGTTGGGAGTGATGGTTTATTTGACTTCTTCAGTAATGATGAAGCAGTACAGCTTGTAGAGTCTTATATCTTGAGAAATCCTTTCGGTGATCCTGCAAAATTTCTTATTGAGCAATTAGTTGCAAGAGCAGCTGATTCTGCAGGCTTCAGCACGGAAGAGTTGATGAATGTTCCCGATGGGAGGAGGAGGAAGTACCATGATGACGTGACCGTTATTGTGATCATCCTTGGCACGAATCAACGGACTTCAAAGGCATCAATTTGCACCTAG 1563 0.4056 MDFLNQEISMHSPDGELKISFGYQCNSDRGIAYNEIKRTSSFSCLSGAALSANATLANTNICNGVIGEEILPSLDSPKSFRTVPSSSSFPKLDILSSSVNSSFSNLSCSPSTPSNMLEHDPCTLKSMSAPSRTEGFLNAMDVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDSIVSYFNMLNWDLEPDSIKASDHVAVGESFPYNLDDSLILQEHQSPSKFKGSNSGLDITSPSKSEAASKSFSHSTILDGLQHVLSQVENDFLCMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSGAVLATSCTGSTMNGNERLKAIQLTDSHTVDNEAERIRVLSDHPDDPKTIVAGKVKGKLKVTRALGVGYLKKKILNDALMGILQVHDLKSPPYISTDPSLNVHKISDSDQFVIVGSDGLFDFFSNDEAVQLVESYILRNPFGDPAKFLIEQLVARAADSAGFSTEELMNVPDGRRRKYHDDVTVIVIILGTNQRTSKASICT* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00128 520 SMART PP2C_4 127 505 IPR001932 -
Lapu9g00128 520 CDD PP2Cc 149 507 IPR001932 -
Lapu9g00128 520 Gene3D - 109 516 IPR036457 -
Lapu9g00128 520 PANTHER PROTEIN PHOSPHATASE 2C 134 505 IPR015655 GO:0004722|GO:0006470
Lapu9g00128 520 Pfam Protein phosphatase 2C 274 462 IPR001932 -
Lapu9g00128 520 SUPERFAMILY PP2C-like 149 508 IPR036457 -
Lapu9g00128 520 ProSiteProfiles PPM-type phosphatase domain profile. 136 507 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00128 Lapu-Chr9 1152101 1155896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00128 13 517 PP2C-type Phosphatase Gene Family AT3G16560 61.154 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00128 - - gmx:100791404 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00128 9 1152101 1155896 Lapu9g00128 9 1152101 1155896 ECH
Lapu3g00261 3 2718183 2722433 Lapu9g00128 9 1152101 1155896 PCT