Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00122 ATGGATGTTTTGGTGGCGCAGAAAAGGAAGCAGCGAGAGTTTGCGTTACCGTCGATTTCTGAGGTTTCATCTTCTTCATCTGCTTCGCCGGGGGTTGCTGTGTTCGCTGGTGACCGTCTTCAAATTCGGAACGAATCTAACCGTATTGTTATCAATGCTCATCTTATAGATATTCAGCTATTCAGGTTAGGTCCTATTGAATCGGTTTGCATGGTGGATGGGTCTGATGCTGACAAACAGACATCGTATTCCAGTGGAGTCGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGAGGAAATCTACCAAATGGAACTAACGTAATAACTTGTAAAAGCAAATTTGATGAGAAGATAGAGTCGTCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAACAAAATATGTTGCAGGACTATGTGAGGACAGGAAGCTATTACACTGCGGTTTTTGAGAATCGAGCAGATTTTGTAGGCCGTGTAGTAGTTGATGTTGGTGCTGGTAGTGGAATTTTGTCATTATTTGCTGCCCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGGAACCCAATACTTGGTCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAACTGCCTGAGAGAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTCAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACCCCTAATGGGAAAATGTTTCCTGGTGTAGGAAGAATTCACATGGCTCCCTTCAGTGATGAATACTTGTTTGTTGAAATTGCTAATAAGGCACTGTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACGCCCTTACATGGGACTGCCTTTCAAGGATACTTTTCTCAGCCTGTTGTGGACGCTTTTGATCCGAGGTTGCTAATAGCTGCTCCTATGTTTCATGTGATAGACTTTACCAAAATAAAGGAAGAAGAGCTATATGAAATTGACATTCCTCTCAGATTCATAGCCACTGTGGGTGCCAGGTTACATGGGTTGGCTTGTTGGTTTGATGTACTGTTCAATGGAAGTACTGCTCGAAGGTGGCTTACCACTGCCCCGGGTTCACCTACAACCCACTGGTATCAGTTACGCTGCGTTCTCTCACAGCCAATATATGTGGTGGCAGGGCAAGAAATTACTGGCAGGATGCACTTGATTGCCCACACTGCTCAGAGTTATACAATCTATTTAACATTGTCAGCTAAAGCATGGGGCCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCCTCCTGTAAACTTGATCTGAAAGAGCCTTACTATAGAATGTCTCAACCACAAGCTTATCCATTAAACCAAGATCAGCAACCTCAACCACTTTTACAGACACAGGATATAAACATCCAATTTCAAGATTTGGATGAGGTGGAGATGATGCAGCAGCCTTCGCCTAAGTCATGTGCTCAAATTGACTCCATGCAGAATGCATAA 1605 0.4268 MDVLVAQKRKQREFALPSISEVSSSSSASPGVAVFAGDRLQIRNESNRIVINAHLIDIQLFRLGPIESVCMVDGSDADKQTSYSSGVAIQFRNEEESEAFHCVFQQWKKEFNVQGGNLPNGTNVITCKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGSYYTAVFENRADFVGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPERADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPGVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVIDFTKIKEEELYEIDIPLRFIATVGARLHGLACWFDVLFNGSTARRWLTTAPGSPTTHWYQLRCVLSQPIYVVAGQEITGRMHLIAHTAQSYTIYLTLSAKAWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLNQDQQPQPLLQTQDINIQFQDLDEVEMMQQPSPKSCAQIDSMQNA* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00122 534 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Lapu9g00122 534 Gene3D Vaccinia Virus protein VP39 122 283 IPR029063 -
Lapu9g00122 534 Pfam Ribosomal protein L11 methyltransferase (PrmA) 179 251 - -
Lapu9g00122 534 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 99 466 IPR025799 GO:0016274|GO:0018216
Lapu9g00122 534 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Lapu9g00122 534 CDD AdoMet_MTases 182 282 - -
Lapu9g00122 534 Gene3D - 285 492 - -
Lapu9g00122 534 FunFam Probable histone-arginine methyltransferase CARM1 123 283 - -
Lapu9g00122 534 FunFam Probable histone-arginine methyltransferase CARM1 285 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00122 Lapu-Chr9 1126618 1135097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00122 143 432 C2H2 Transcription Factor Family AT3G12270 33.333 5.28e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00122 K05931 - gmx:100818828 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00122 9 1126618 1135097 Lapu9g00122 9 1126618 1135097 ECH
Lapu3g00266 3 2747873 2754445 Lapu9g00122 9 1126618 1135097 PCT