Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu9g00120 | ATGTCTTTACCACAACTTCAAAAGCTATCACTTCATTTTAACACGTCTTCTTCCTTTCCACCTTGGCTCACTTCCCCTTCTTGTTCCACTTTGGACATAGATTCATCTTCCCCTACTGCGTTTCTCACTGTTCAGTGGTTAAGGTTTCTTCTTCTATCACCATGTCCTCAGAGACTTTTTCTCTCTGGTGTTGACTCCATATTCTTGCTCACTCTTTTTGCCTTTGCAGCTGCTAAACTATATTCTAGATTCACTTCCCCTCACACCTCTTCCTCTTCCATTACCAAACGCCTTTTGCAGGAGAACCACCCTGACTATAAAGTCACCTTCTGGTTCAAGCTACCCTTCTTGGTAACCACCCTTTTGGTCGCAGCTTACACTGTTCTTGGTGTCTTGGCCTTCACTCAAACGACTCTTTCTTCATGGAAAGTCATAGAGGCACTCTTTCGGCTCTTTCAAGCTGTGGCCAACATAGTGGTAGTGATCCTATTAGTTCACGAGAACAAGTTCAAAGCTTCAGAGCACCCTTTCTCGCTGAGAATGTATTGGATTGCAAACATGGTGGTTTCGTGCTTTTTTGCCATTTCAGCTATTGTTCGCTTTGTAACTGTGGATGCAGCGAGGTTGGAGCCTAGTTTGAGAGTGGATGACGTGTTTTCTTTGGTTAATCTCCCACTTTCTGCGTTCCTTTTCGTAGTAGCCATGAAAGGACTAACGGGGATTCAAGTGATTAGAATTTCTGATGAAGTGACAACATATCAGCGCCTTTCTTCCAATGACAGAAATTTGAGTCCTTATGCTCATTCTTCGATTTTTTCCAAAGTAGTGTGGCTTTGGATGAACCCTTTGCTGAACAAAGGGTACCGAACACCCCTCAAGCTCGATGATGTGCCTTCTCTTCCTCTGGATTTCCGAGCAGAAAAGATGTCAGAGCTTTTCCAAAGAAATTGGCCGAAGCCGGAGGAAAACAGCAAGCACCCTGTTGGTCTCACCTTGTTTAGATGCTTCTGGAAGCGCATTGCCTTCACTGGCTTCCTTGCAGTCATAAGACTTGCGGTTATGTACGTTGGTCCAATGCTTATTCAGAGTTTTGTTGACTTCACCGCAAGGAAAGACAGCACCCCCCTTGAAGGACTTATTCTGATTCTGATCCTGTTTTTTGCAAAATCAGTTGAGGTTCTCTCTGTGCACCAGTTCAACTTCAACTCTCAAAAACTAGGTATGTTAATGCGTTCCAGCATCATCACTTCCGTGTACAAGAAGGGTTTGAGGCTGTCAAGTTCCTCAAGACAGGCTCATGGCACTGGCCAGATTGTGAACCACATGGCTGTTGATGCTCAACAGCTCTCAGATTTGATGATGCAGTTTCATCCCATATGGTTGATGCCACTGCAAGTAGCTGCAGCTTTGGCACTTATCTACAACAGTATTGGCGTGTCAGCGCTTGCAGCGCTACTTGGAACGAGTTTGGTGTTTATTTTCACACTCATTCGCACCAAGAAGAGCAACAGCTTCCAGTTCAGGATAATGAAGAGCCGTGACTTGAGGATGAAGGCCACGAATGAGTTGCTTAACAACATGCGTGTCATCAAGTTCCAAGCGTGGGAGGAGTATTTTGGCAACAAGATTCAGCAGTTTCGCGAAGCCGAACACGGTTCGATTGGAAAGTTCTTGTACTACTTTGCCATTAACATGGGGGTTCTGAGCACTGCTCCTTTGTTGGTATGTGTTCTCACATTTGGAGCTGCTACTCTTCAGGGTGTTCCTTTGAACGCTGGCACTGTGTTCACAATCACTTCAGTGATCAAGATTTTGCAAGAGCCCGTGAGGACCTTCCCTCAGGCTCTTATCTTGATTTCCCAAGCAATGATATCTTTAGGGAGGTTGGATGAGTTCATGACGAGCAAGGAAATGGATGAGGGTGCAGTGGAGAGATTGGATGGATGTGATGGTGACACCGCTGTGGAGATAAAAAATGGGGAATTCTCCTGGGATGATGCAGATGTGAATGCGGCTCTGAAAGTTGAAGAGTTGGAAATCAAGAGAGGGAACCACGCAGCTGTTGTGGGAACAGTTGGGTCAGGCAAGTCTTCGTTACTGGCTTCTTTGTTAGGAGAAATGATCAAGATATCAGGAAAGGTCAGAGTTTGTGGGTCAATAGCCTACGTAGCACAGACATCATGGATTCAGAATGCAACAATCCAAGACAACGTATTATTTGGTTTACCAATGAACAGAGAGAAGTACGACGAAGCTATAAGAGTGTGTTGCCTAGAAAAGGATCTTGAAATGATGGAATATGGAGATCAAACTGAGATTGGAGAAAGGGGTATTAACCTTAGTGGTGGCCAGAAGCAACGCGTACAACTTGCTAGAGCTGTATACCAAGACTGTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCACAAACTGGGTCATTTATTTTCAAGGAATGTATCATGGGGGCTCTAAAAAACAAGACCATTTTACTTGTAACACACCAAGTTGACTTCTTGCATAACGTTGACTGTATAATGGTGATGAGAGAAGGGAGAATCGTGCAAAGCGGGAAGTATGATGAACTTCTCAATGCGGGCCTGGATTTTGGTGCACTTGTGACTGCTCATGAATCCTCTATGGAGATTGCAGAATCTAGTGATAAAGGTGGCGATGATTCGGTTCAGTCTCCGAAACTGGCTCGACTCCCTTCAAAAGAAAACGAAAAGGCAGGTGAAAAGCAACCTCAAGATCAAGCTAAGTCAGCTAACACCACAGCGAAGCTCATTGAAGATGAGGAAAGAGAAACCGGCCGTGTGAACCTGAAAGTGTATAAACACTACTTCACTGAAGCATTTGGGTGGTGGGGTATTGTACTGATGCTGGCAATGTCTCTAACATGGATTTTGTCTTTCTTGGCGGGTGACTACTGGCTAGCAATTGGAACTGCAGAAGGCACCAGCTTTGCTCCTTCTACATTCATTACTGTCTATGCTTGCATAGCAGTTGTTGTAACTTTTGTTGTGATGGCAAGATCACTCTTATTTACCTATTGGGGTCTGAAGACATCTCAAAGCTTCTTTAGTGGAATGCTTCAAAGCATCCTTCATGCACCAATGTCATTCTTTGACACCACTCCCTCCGGAAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGATTGATATATCAATCCCAATGTTAGTAAACTTCGTAATGGTCGCATACTTCTCAGTGGTCAGCATCCTCATTGTAACATGCCAAAATGCTTGGGAAACGGTCTTCCTCTTAATCCCACTGTTCTATCTTAATAACTGGTATCGGAAATATTACCTTGCATCTTCTCGGGAATTGACTCGTCTTGATTCTATCACCAAAGCTCCTGTGATTCACCACTTTTCAGAAACCATTGCTGGTGTTATGACCATTCGAGGCTTCAGAAAACAGAACGCATTTTGTCAAGAAAATATTGACAAAGTCAATGCTAGTCTGAGAATGGATTTCCACAACAATGGTGCCAATGAATGGCTTGGTTTTCGCTTGGACTACATGGGAGTGGTTTTCCTTTGCATTGCCACTATTCTCATGATCTTTCTCCCTAGTGCTATTATGAGGCCAGAATATGTTGGTTTGTCTTTGTCCTATGGTTTGGCTCTCAGTAGCATTTTGGCCTTCACTATAACAATGACTTGCTCTATCGAGAATAAAATGGTTTCAGTTGAGAGAATAAAGCAGTTCACCAACCTTCCCTCAGAAGCTCAATGGAAAATGGCTGATAGCTCTCCTCCTAAGAATTGGCCCAGCCATGGCCACATTGAGTTAAACAATTTGCAGGTTCGGTATCGGCCAAATACTCCTCTGGTTCTCAAAGGAGTCTCTCTCACCATTCAAGGAGGAGAAAAGATTGGTGTTGTTGGTCGAACAGGGAGTGGGAAATCAACCCTCATTCAGGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGGAAAATAATTGTTGATGGGATCAACATTTGCACTGTGGGGCTTCATGATCTGAGGTCTCGATTTGGAATTATCCCTCAAGAGCCTGTTCTCTTTCAAGGAACAGTACGAAGCAACATTGATCCCCTTGGACTGTATTCAGAAGAAGAAATATGGAAGAGCCTAGAACGTTGCCAACTGAAAGATGTGGTGGCTGCAAAGCCTGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGACAACTTCTATGCCTGGGAAGGATCATGCTAAAACGGAGCAAAATACTATTCATGGATGAGGCAACAGCATCCGTTGATTCACAAACTGATTCTGTGATACAGAAAATCATCCGTGAGGACTTTGCAGATCGTACAATTATCAGCATTGCTCATAGAATACCAACAGTAATGGACTGTGACAAAGTTTTAGTCATTGATGAAGGGCTTTCAAAAGAATATGACAAGCCATCACGTTTGCTAGAAAGGCCTTCACTTTTTGGAGCATTGGTTAAGGAGTACTCCAATAGATCTGCATAA | 4548 | 0.4376 | MSLPQLQKLSLHFNTSSSFPPWLTSPSCSTLDIDSSSPTAFLTVQWLRFLLLSPCPQRLFLSGVDSIFLLTLFAFAAAKLYSRFTSPHTSSSSITKRLLQENHPDYKVTFWFKLPFLVTTLLVAAYTVLGVLAFTQTTLSSWKVIEALFRLFQAVANIVVVILLVHENKFKASEHPFSLRMYWIANMVVSCFFAISAIVRFVTVDAARLEPSLRVDDVFSLVNLPLSAFLFVVAMKGLTGIQVIRISDEVTTYQRLSSNDRNLSPYAHSSIFSKVVWLWMNPLLNKGYRTPLKLDDVPSLPLDFRAEKMSELFQRNWPKPEENSKHPVGLTLFRCFWKRIAFTGFLAVIRLAVMYVGPMLIQSFVDFTARKDSTPLEGLILILILFFAKSVEVLSVHQFNFNSQKLGMLMRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVAAALALIYNSIGVSALAALLGTSLVFIFTLIRTKKSNSFQFRIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGSIGKFLYYFAINMGVLSTAPLLVCVLTFGAATLQGVPLNAGTVFTITSVIKILQEPVRTFPQALILISQAMISLGRLDEFMTSKEMDEGAVERLDGCDGDTAVEIKNGEFSWDDADVNAALKVEELEIKRGNHAAVVGTVGSGKSSLLASLLGEMIKISGKVRVCGSIAYVAQTSWIQNATIQDNVLFGLPMNREKYDEAIRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDVFSAVDAQTGSFIFKECIMGALKNKTILLVTHQVDFLHNVDCIMVMREGRIVQSGKYDELLNAGLDFGALVTAHESSMEIAESSDKGGDDSVQSPKLARLPSKENEKAGEKQPQDQAKSANTTAKLIEDEERETGRVNLKVYKHYFTEAFGWWGIVLMLAMSLTWILSFLAGDYWLAIGTAEGTSFAPSTFITVYACIAVVVTFVVMARSLLFTYWGLKTSQSFFSGMLQSILHAPMSFFDTTPSGRILSRVSTDILWIDISIPMLVNFVMVAYFSVVSILIVTCQNAWETVFLLIPLFYLNNWYRKYYLASSRELTRLDSITKAPVIHHFSETIAGVMTIRGFRKQNAFCQENIDKVNASLRMDFHNNGANEWLGFRLDYMGVVFLCIATILMIFLPSAIMRPEYVGLSLSYGLALSSILAFTITMTCSIENKMVSVERIKQFTNLPSEAQWKMADSSPPKNWPSHGHIELNNLQVRYRPNTPLVLKGVSLTIQGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKIIVDGINICTVGLHDLRSRFGIIPQEPVLFQGTVRSNIDPLGLYSEEEIWKSLERCQLKDVVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDSVIQKIIREDFADRTIISIAHRIPTVMDCDKVLVIDEGLSKEYDKPSRLLERPSLFGALVKEYSNRSA* | 1516 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu9g00120 | 1515 | Gene3D | - | 1258 | 1507 | IPR027417 | - | |
Lapu9g00120 | 1515 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1275 | 1509 | IPR003439 | GO:0005524 | |
Lapu9g00120 | 1515 | MobiDBLite | consensus disorder prediction | 886 | 932 | - | - | |
Lapu9g00120 | 1515 | Gene3D | ABC transporter type 1, transmembrane domain | 330 | 632 | IPR036640 | GO:0005524|GO:0016020 | |
Lapu9g00120 | 1515 | CDD | ABCC_MRP_domain1 | 655 | 855 | - | - | |
Lapu9g00120 | 1515 | Pfam | ABC transporter | 1292 | 1440 | IPR003439 | GO:0005524 | |
Lapu9g00120 | 1515 | CDD | ABCC_MRP_domain2 | 1273 | 1493 | - | - | |
Lapu9g00120 | 1515 | SUPERFAMILY | ABC transporter transmembrane region | 330 | 637 | IPR036640 | GO:0005524|GO:0016020 | |
Lapu9g00120 | 1515 | FunFam | ABC transporter C family member 10 | 324 | 637 | - | - | |
Lapu9g00120 | 1515 | Gene3D | ABC transporter type 1, transmembrane domain | 923 | 1257 | IPR036640 | GO:0005524|GO:0016020 | |
Lapu9g00120 | 1515 | Gene3D | - | 633 | 898 | IPR027417 | - | |
Lapu9g00120 | 1515 | FunFam | ABC transporter C family member 4 | 638 | 897 | - | - | |
Lapu9g00120 | 1515 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1265 | 1508 | IPR027417 | - | |
Lapu9g00120 | 1515 | ProSitePatterns | ABC transporters family signature. | 780 | 794 | IPR017871 | GO:0005524|GO:0016887 | |
Lapu9g00120 | 1515 | CDD | ABC_6TM_ABCC_D1 | 342 | 629 | IPR044746 | GO:0140359 | |
Lapu9g00120 | 1515 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 655 | 878 | IPR003439 | GO:0005524 | |
Lapu9g00120 | 1515 | SUPERFAMILY | ABC transporter transmembrane region | 957 | 1255 | IPR036640 | GO:0005524|GO:0016020 | |
Lapu9g00120 | 1515 | FunFam | ABC transporter C family member 5 | 923 | 1256 | - | - | |
Lapu9g00120 | 1515 | SMART | AAA_5 | 1301 | 1485 | IPR003593 | GO:0016887 | |
Lapu9g00120 | 1515 | SMART | AAA_5 | 682 | 855 | IPR003593 | GO:0016887 | |
Lapu9g00120 | 1515 | FunFam | ABC transporter C family member 3 | 1258 | 1509 | - | - | |
Lapu9g00120 | 1515 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 957 | 1238 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lapu9g00120 | 1515 | Pfam | ABC transporter | 677 | 806 | IPR003439 | GO:0005524 | |
Lapu9g00120 | 1515 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 652 | 875 | IPR027417 | - | |
Lapu9g00120 | 1515 | CDD | ABC_6TM_ABCC_D2 | 956 | 1250 | IPR044726 | GO:0140359 | |
Lapu9g00120 | 1515 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 341 | 621 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lapu9g00120 | 1515 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 267 | 1511 | - | - | |
Lapu9g00120 | 1515 | Pfam | ABC transporter transmembrane region | 342 | 609 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lapu9g00120 | 1515 | Pfam | ABC transporter transmembrane region | 976 | 1199 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu9g00120 | Lapu-Chr9 | 1109926 | 1117356 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu9g00120 | 629 | 904 | Calmodulin-binding Proteins | AT2G36910 | 29.766 | 1.24e-25 | 113 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu9g00120 | - | K05665 | vra:106762025 | 2676.35 |