Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00120 ATGTCTTTACCACAACTTCAAAAGCTATCACTTCATTTTAACACGTCTTCTTCCTTTCCACCTTGGCTCACTTCCCCTTCTTGTTCCACTTTGGACATAGATTCATCTTCCCCTACTGCGTTTCTCACTGTTCAGTGGTTAAGGTTTCTTCTTCTATCACCATGTCCTCAGAGACTTTTTCTCTCTGGTGTTGACTCCATATTCTTGCTCACTCTTTTTGCCTTTGCAGCTGCTAAACTATATTCTAGATTCACTTCCCCTCACACCTCTTCCTCTTCCATTACCAAACGCCTTTTGCAGGAGAACCACCCTGACTATAAAGTCACCTTCTGGTTCAAGCTACCCTTCTTGGTAACCACCCTTTTGGTCGCAGCTTACACTGTTCTTGGTGTCTTGGCCTTCACTCAAACGACTCTTTCTTCATGGAAAGTCATAGAGGCACTCTTTCGGCTCTTTCAAGCTGTGGCCAACATAGTGGTAGTGATCCTATTAGTTCACGAGAACAAGTTCAAAGCTTCAGAGCACCCTTTCTCGCTGAGAATGTATTGGATTGCAAACATGGTGGTTTCGTGCTTTTTTGCCATTTCAGCTATTGTTCGCTTTGTAACTGTGGATGCAGCGAGGTTGGAGCCTAGTTTGAGAGTGGATGACGTGTTTTCTTTGGTTAATCTCCCACTTTCTGCGTTCCTTTTCGTAGTAGCCATGAAAGGACTAACGGGGATTCAAGTGATTAGAATTTCTGATGAAGTGACAACATATCAGCGCCTTTCTTCCAATGACAGAAATTTGAGTCCTTATGCTCATTCTTCGATTTTTTCCAAAGTAGTGTGGCTTTGGATGAACCCTTTGCTGAACAAAGGGTACCGAACACCCCTCAAGCTCGATGATGTGCCTTCTCTTCCTCTGGATTTCCGAGCAGAAAAGATGTCAGAGCTTTTCCAAAGAAATTGGCCGAAGCCGGAGGAAAACAGCAAGCACCCTGTTGGTCTCACCTTGTTTAGATGCTTCTGGAAGCGCATTGCCTTCACTGGCTTCCTTGCAGTCATAAGACTTGCGGTTATGTACGTTGGTCCAATGCTTATTCAGAGTTTTGTTGACTTCACCGCAAGGAAAGACAGCACCCCCCTTGAAGGACTTATTCTGATTCTGATCCTGTTTTTTGCAAAATCAGTTGAGGTTCTCTCTGTGCACCAGTTCAACTTCAACTCTCAAAAACTAGGTATGTTAATGCGTTCCAGCATCATCACTTCCGTGTACAAGAAGGGTTTGAGGCTGTCAAGTTCCTCAAGACAGGCTCATGGCACTGGCCAGATTGTGAACCACATGGCTGTTGATGCTCAACAGCTCTCAGATTTGATGATGCAGTTTCATCCCATATGGTTGATGCCACTGCAAGTAGCTGCAGCTTTGGCACTTATCTACAACAGTATTGGCGTGTCAGCGCTTGCAGCGCTACTTGGAACGAGTTTGGTGTTTATTTTCACACTCATTCGCACCAAGAAGAGCAACAGCTTCCAGTTCAGGATAATGAAGAGCCGTGACTTGAGGATGAAGGCCACGAATGAGTTGCTTAACAACATGCGTGTCATCAAGTTCCAAGCGTGGGAGGAGTATTTTGGCAACAAGATTCAGCAGTTTCGCGAAGCCGAACACGGTTCGATTGGAAAGTTCTTGTACTACTTTGCCATTAACATGGGGGTTCTGAGCACTGCTCCTTTGTTGGTATGTGTTCTCACATTTGGAGCTGCTACTCTTCAGGGTGTTCCTTTGAACGCTGGCACTGTGTTCACAATCACTTCAGTGATCAAGATTTTGCAAGAGCCCGTGAGGACCTTCCCTCAGGCTCTTATCTTGATTTCCCAAGCAATGATATCTTTAGGGAGGTTGGATGAGTTCATGACGAGCAAGGAAATGGATGAGGGTGCAGTGGAGAGATTGGATGGATGTGATGGTGACACCGCTGTGGAGATAAAAAATGGGGAATTCTCCTGGGATGATGCAGATGTGAATGCGGCTCTGAAAGTTGAAGAGTTGGAAATCAAGAGAGGGAACCACGCAGCTGTTGTGGGAACAGTTGGGTCAGGCAAGTCTTCGTTACTGGCTTCTTTGTTAGGAGAAATGATCAAGATATCAGGAAAGGTCAGAGTTTGTGGGTCAATAGCCTACGTAGCACAGACATCATGGATTCAGAATGCAACAATCCAAGACAACGTATTATTTGGTTTACCAATGAACAGAGAGAAGTACGACGAAGCTATAAGAGTGTGTTGCCTAGAAAAGGATCTTGAAATGATGGAATATGGAGATCAAACTGAGATTGGAGAAAGGGGTATTAACCTTAGTGGTGGCCAGAAGCAACGCGTACAACTTGCTAGAGCTGTATACCAAGACTGTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCACAAACTGGGTCATTTATTTTCAAGGAATGTATCATGGGGGCTCTAAAAAACAAGACCATTTTACTTGTAACACACCAAGTTGACTTCTTGCATAACGTTGACTGTATAATGGTGATGAGAGAAGGGAGAATCGTGCAAAGCGGGAAGTATGATGAACTTCTCAATGCGGGCCTGGATTTTGGTGCACTTGTGACTGCTCATGAATCCTCTATGGAGATTGCAGAATCTAGTGATAAAGGTGGCGATGATTCGGTTCAGTCTCCGAAACTGGCTCGACTCCCTTCAAAAGAAAACGAAAAGGCAGGTGAAAAGCAACCTCAAGATCAAGCTAAGTCAGCTAACACCACAGCGAAGCTCATTGAAGATGAGGAAAGAGAAACCGGCCGTGTGAACCTGAAAGTGTATAAACACTACTTCACTGAAGCATTTGGGTGGTGGGGTATTGTACTGATGCTGGCAATGTCTCTAACATGGATTTTGTCTTTCTTGGCGGGTGACTACTGGCTAGCAATTGGAACTGCAGAAGGCACCAGCTTTGCTCCTTCTACATTCATTACTGTCTATGCTTGCATAGCAGTTGTTGTAACTTTTGTTGTGATGGCAAGATCACTCTTATTTACCTATTGGGGTCTGAAGACATCTCAAAGCTTCTTTAGTGGAATGCTTCAAAGCATCCTTCATGCACCAATGTCATTCTTTGACACCACTCCCTCCGGAAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGATTGATATATCAATCCCAATGTTAGTAAACTTCGTAATGGTCGCATACTTCTCAGTGGTCAGCATCCTCATTGTAACATGCCAAAATGCTTGGGAAACGGTCTTCCTCTTAATCCCACTGTTCTATCTTAATAACTGGTATCGGAAATATTACCTTGCATCTTCTCGGGAATTGACTCGTCTTGATTCTATCACCAAAGCTCCTGTGATTCACCACTTTTCAGAAACCATTGCTGGTGTTATGACCATTCGAGGCTTCAGAAAACAGAACGCATTTTGTCAAGAAAATATTGACAAAGTCAATGCTAGTCTGAGAATGGATTTCCACAACAATGGTGCCAATGAATGGCTTGGTTTTCGCTTGGACTACATGGGAGTGGTTTTCCTTTGCATTGCCACTATTCTCATGATCTTTCTCCCTAGTGCTATTATGAGGCCAGAATATGTTGGTTTGTCTTTGTCCTATGGTTTGGCTCTCAGTAGCATTTTGGCCTTCACTATAACAATGACTTGCTCTATCGAGAATAAAATGGTTTCAGTTGAGAGAATAAAGCAGTTCACCAACCTTCCCTCAGAAGCTCAATGGAAAATGGCTGATAGCTCTCCTCCTAAGAATTGGCCCAGCCATGGCCACATTGAGTTAAACAATTTGCAGGTTCGGTATCGGCCAAATACTCCTCTGGTTCTCAAAGGAGTCTCTCTCACCATTCAAGGAGGAGAAAAGATTGGTGTTGTTGGTCGAACAGGGAGTGGGAAATCAACCCTCATTCAGGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGGAAAATAATTGTTGATGGGATCAACATTTGCACTGTGGGGCTTCATGATCTGAGGTCTCGATTTGGAATTATCCCTCAAGAGCCTGTTCTCTTTCAAGGAACAGTACGAAGCAACATTGATCCCCTTGGACTGTATTCAGAAGAAGAAATATGGAAGAGCCTAGAACGTTGCCAACTGAAAGATGTGGTGGCTGCAAAGCCTGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGACAACTTCTATGCCTGGGAAGGATCATGCTAAAACGGAGCAAAATACTATTCATGGATGAGGCAACAGCATCCGTTGATTCACAAACTGATTCTGTGATACAGAAAATCATCCGTGAGGACTTTGCAGATCGTACAATTATCAGCATTGCTCATAGAATACCAACAGTAATGGACTGTGACAAAGTTTTAGTCATTGATGAAGGGCTTTCAAAAGAATATGACAAGCCATCACGTTTGCTAGAAAGGCCTTCACTTTTTGGAGCATTGGTTAAGGAGTACTCCAATAGATCTGCATAA 4548 0.4376 MSLPQLQKLSLHFNTSSSFPPWLTSPSCSTLDIDSSSPTAFLTVQWLRFLLLSPCPQRLFLSGVDSIFLLTLFAFAAAKLYSRFTSPHTSSSSITKRLLQENHPDYKVTFWFKLPFLVTTLLVAAYTVLGVLAFTQTTLSSWKVIEALFRLFQAVANIVVVILLVHENKFKASEHPFSLRMYWIANMVVSCFFAISAIVRFVTVDAARLEPSLRVDDVFSLVNLPLSAFLFVVAMKGLTGIQVIRISDEVTTYQRLSSNDRNLSPYAHSSIFSKVVWLWMNPLLNKGYRTPLKLDDVPSLPLDFRAEKMSELFQRNWPKPEENSKHPVGLTLFRCFWKRIAFTGFLAVIRLAVMYVGPMLIQSFVDFTARKDSTPLEGLILILILFFAKSVEVLSVHQFNFNSQKLGMLMRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVAAALALIYNSIGVSALAALLGTSLVFIFTLIRTKKSNSFQFRIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGSIGKFLYYFAINMGVLSTAPLLVCVLTFGAATLQGVPLNAGTVFTITSVIKILQEPVRTFPQALILISQAMISLGRLDEFMTSKEMDEGAVERLDGCDGDTAVEIKNGEFSWDDADVNAALKVEELEIKRGNHAAVVGTVGSGKSSLLASLLGEMIKISGKVRVCGSIAYVAQTSWIQNATIQDNVLFGLPMNREKYDEAIRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDVFSAVDAQTGSFIFKECIMGALKNKTILLVTHQVDFLHNVDCIMVMREGRIVQSGKYDELLNAGLDFGALVTAHESSMEIAESSDKGGDDSVQSPKLARLPSKENEKAGEKQPQDQAKSANTTAKLIEDEERETGRVNLKVYKHYFTEAFGWWGIVLMLAMSLTWILSFLAGDYWLAIGTAEGTSFAPSTFITVYACIAVVVTFVVMARSLLFTYWGLKTSQSFFSGMLQSILHAPMSFFDTTPSGRILSRVSTDILWIDISIPMLVNFVMVAYFSVVSILIVTCQNAWETVFLLIPLFYLNNWYRKYYLASSRELTRLDSITKAPVIHHFSETIAGVMTIRGFRKQNAFCQENIDKVNASLRMDFHNNGANEWLGFRLDYMGVVFLCIATILMIFLPSAIMRPEYVGLSLSYGLALSSILAFTITMTCSIENKMVSVERIKQFTNLPSEAQWKMADSSPPKNWPSHGHIELNNLQVRYRPNTPLVLKGVSLTIQGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKIIVDGINICTVGLHDLRSRFGIIPQEPVLFQGTVRSNIDPLGLYSEEEIWKSLERCQLKDVVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDSVIQKIIREDFADRTIISIAHRIPTVMDCDKVLVIDEGLSKEYDKPSRLLERPSLFGALVKEYSNRSA* 1516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00120 1515 Gene3D - 1258 1507 IPR027417 -
Lapu9g00120 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1275 1509 IPR003439 GO:0005524
Lapu9g00120 1515 MobiDBLite consensus disorder prediction 886 932 - -
Lapu9g00120 1515 Gene3D ABC transporter type 1, transmembrane domain 330 632 IPR036640 GO:0005524|GO:0016020
Lapu9g00120 1515 CDD ABCC_MRP_domain1 655 855 - -
Lapu9g00120 1515 Pfam ABC transporter 1292 1440 IPR003439 GO:0005524
Lapu9g00120 1515 CDD ABCC_MRP_domain2 1273 1493 - -
Lapu9g00120 1515 SUPERFAMILY ABC transporter transmembrane region 330 637 IPR036640 GO:0005524|GO:0016020
Lapu9g00120 1515 FunFam ABC transporter C family member 10 324 637 - -
Lapu9g00120 1515 Gene3D ABC transporter type 1, transmembrane domain 923 1257 IPR036640 GO:0005524|GO:0016020
Lapu9g00120 1515 Gene3D - 633 898 IPR027417 -
Lapu9g00120 1515 FunFam ABC transporter C family member 4 638 897 - -
Lapu9g00120 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1265 1508 IPR027417 -
Lapu9g00120 1515 ProSitePatterns ABC transporters family signature. 780 794 IPR017871 GO:0005524|GO:0016887
Lapu9g00120 1515 CDD ABC_6TM_ABCC_D1 342 629 IPR044746 GO:0140359
Lapu9g00120 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 655 878 IPR003439 GO:0005524
Lapu9g00120 1515 SUPERFAMILY ABC transporter transmembrane region 957 1255 IPR036640 GO:0005524|GO:0016020
Lapu9g00120 1515 FunFam ABC transporter C family member 5 923 1256 - -
Lapu9g00120 1515 SMART AAA_5 1301 1485 IPR003593 GO:0016887
Lapu9g00120 1515 SMART AAA_5 682 855 IPR003593 GO:0016887
Lapu9g00120 1515 FunFam ABC transporter C family member 3 1258 1509 - -
Lapu9g00120 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 957 1238 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu9g00120 1515 Pfam ABC transporter 677 806 IPR003439 GO:0005524
Lapu9g00120 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 652 875 IPR027417 -
Lapu9g00120 1515 CDD ABC_6TM_ABCC_D2 956 1250 IPR044726 GO:0140359
Lapu9g00120 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 341 621 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu9g00120 1515 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 267 1511 - -
Lapu9g00120 1515 Pfam ABC transporter transmembrane region 342 609 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu9g00120 1515 Pfam ABC transporter transmembrane region 976 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00120 Lapu-Chr9 1109926 1117356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00120 629 904 Calmodulin-binding Proteins AT2G36910 29.766 1.24e-25 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00120 - K05665 vra:106762025 2676.35