Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00118 ATGCCGCAGGGCAATGCGGCGGCCGCCGCCGCTCTTTTGGACCACGGCGGCGATGCTGGAGACGCCGTCATGGCGCGGTGGCTCCAGTCCGCCGGCTTGCAGCATCTCGCCTCTCCTCTCGCTTCTACGGCCATCGATCATCGCCTCCTCCCCAACCTTCTCATGCAGGGTTATGGAGCACAGTCTGCTGAGGAGAAGCAGAGACTTTTAAAATTAATGAGAAACCTGAATTTCAATGGGGAATCTGGTTCTGAGCCATATACGCCCACCGCCCAATCTTTAGGTGGAGTGGCTGGGTCGGATGGGTTTTATTCTCCTGAGTTTAGGGGGGATTTTGGGGCCGGGCTTTTGGATCTTCACGCTATGGATGATACAGAGCTTTTGTCTGAGCATGTAGTTTCAGAACCTTTTGAGCCGTCACCCTTCATGCCTGGAGATGCTAGAGTATTCGAGGACGATTTTAATCCAATTAACAGCAGGCTGGAAAGTGGGGAAGCAGATGCTGATGCATCAAGTTCTGTACCAGTGAATGAAAAAGAGTATAGCACAAGGGAAAATAATGTTGCTAAAATTAGAGTTGTGGTACGTAAAAGACCCTTAAACAAGAAGGAGCTTGCTAAGAAGGAGGATGATATTGTAACTGTATCTGACAATGCATATTTGACAGTCCATGAACCAAAATTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTGCTTGATGAGCATGTTACCAATGATGAAGTATACCGAACTACAGTTGAACCAATTATTCCTACAATTTTTGAGCGAACGAAAGCTACCTGCTTCGCATATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCTTTACCACTCAGAGCTGCAGAAGACCTTGTTCGACAATTGCATCAGCCAGTTTACCGTAATCAGAGATTTAAATTGTGGCTTAGCTATTTTGAGATATATGGTGGAAAACTTTATGATCTTCTTAATGACAGAAAGAAACTTTGTATGAGGGAAGATGGACGTCAGCAAGTTTGCATTGTAGGATTGCAAGAATTTGAAGTTTCTGATGTACAAATTGTCAAAGAATTTATTGAAAGGGGAAATGCTGCAAGAAGCACAGGATCCACTGGTGCTAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAACTGGTTGTAAAGAAACACAACGAAGTGAAAGAGAGTAGGCGAAACAATGATGGTAATGAGGCAAGAAGTGGGAAGGTTGTGGGGAAAATTTCTTTTATTGATCTTGCTGGAAGTGAACGAGGTGCTGACACTACTGATAATGATCGTCAGACACGGATTGAAGGAGCGGAAATCAATAAGAGCCTTTTGGCATTGAAGGAGTGCATCCGTGCTTTAGACAATGACCAGATCCATATTCCATTTCGGGGAAGTAAACTTACTGAAGTGCTTCGTGACTCCTTTGTGGGTAATTCAAAGACTGTAATGATCTCTTGTATATCTCCAGGTGCTGGATCTTGTGAACACACACTTAATACCTTGAGATACGCAGATCGAGTTAAAAGTCTGTCCAAAAGTGGGAATCCTAGAAAAGACCAGGTCCCAAATCCTGCACCACAAACTAATAAGGAGATTTCATCCACACCGTCCATTCCAGCTAGTGCTGGTGCAGAGGATTTTAACAATCAACGTCAAGAGAAAGCAATGGATATAGGCAGAAAATTTGTTGAAAAGGAAAATTCTTCGTACAGCTCTGCTGCTGCTGCCGAGAAGCAGCCATTGAGTTTTTCTTCAAATTATCTATCAAATGGGCGAGAGGAAAAAGGCTTGCCTTCTGCTTCATTGGACCGGGAGAGGTTTGAACTGAAGAACTCGTATGGTGACTCTACCAGTCAAAAGATGAACTCTTACTCACAAATTGATACAGGTGAGAAATTGCAAAAGGTGTCTCCGCCACGCAGAAAAGGGTCTAAGGATGAAAAACCTGAAAGGCCTGCTAACTGGATGAAAAGGGATGCCAATGGTTCTGATCCCTTCACTACAAGCTCCAAGCAGCAGAGCACAGGGAGCTATAGCACTGTGTCTAAGGATGAAAAGTCTGACAGGCCTTCAAACTGGATGAAAAGGGATTCCAACGGTTCTGATCTTACAAGCTCCAAACAGCAGAGCACAGTGAATTATGTGTCTAAGGATGAAAAATCTGAAAGGCCAGCAAACTGGATGAAAAGGGATGCAAGTAACTCTGATCTCTTCTCTACAAGCTCCAAGCAGCAGAGCACAGGGAACTATAACAATAATACCTCTGGATCCAGGCCTTATGAAGCAGAATCCTCTCCCAACGGAAATATCAATGCAGTACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAGGAAATTGAGGATACGATGGAGATTGTTCGGGAAGAAATGAAACTCCTGGCAGAAGTGGACCAACCGGGAAGCCTTATTGACAACTATGTAACCCAATTGAGTTTTGTGCTTTCTCGCAAAGCAGCGGGTCTGGTGGGTCTTCAAGCTCGTCTTGCAAGATTTCAACATCGACTAAAGGAGCAGGAGATTCTAAGTAGAAAAAGAGTTCCGCGTCAGTAA 2619 0.4433 MPQGNAAAAAALLDHGGDAGDAVMARWLQSAGLQHLASPLASTAIDHRLLPNLLMQGYGAQSAEEKQRLLKLMRNLNFNGESGSEPYTPTAQSLGGVAGSDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVVSEPFEPSPFMPGDARVFEDDFNPINSRLESGEADADASSSVPVNEKEYSTRENNVAKIRVVVRKRPLNKKELAKKEDDIVTVSDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDEHVTNDEVYRTTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRNQRFKLWLSYFEIYGGKLYDLLNDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIERGNAARSTGSTGANEESSRSHAILQLVVKKHNEVKESRRNNDGNEARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPRKDQVPNPAPQTNKEISSTPSIPASAGAEDFNNQRQEKAMDIGRKFVEKENSSYSSAAAAEKQPLSFSSNYLSNGREEKGLPSASLDRERFELKNSYGDSTSQKMNSYSQIDTGEKLQKVSPPRRKGSKDEKPERPANWMKRDANGSDPFTTSSKQQSTGSYSTVSKDEKSDRPSNWMKRDSNGSDLTSSKQQSTVNYVSKDEKSERPANWMKRDASNSDLFSTSSKQQSTGNYNNNTSGSRPYEAESSPNGNINAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAAGLVGLQARLARFQHRLKEQEILSRKRVPRQ* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00118 872 CDD KISc_KIF2_like 190 522 - -
Lapu9g00118 872 MobiDBLite consensus disorder prediction 675 695 - -
Lapu9g00118 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 524 IPR027417 -
Lapu9g00118 872 MobiDBLite consensus disorder prediction 626 646 - -
Lapu9g00118 872 Coils Coil 844 864 - -
Lapu9g00118 872 ProSitePatterns Kinesin motor domain signature. 423 434 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu9g00118 872 PRINTS Kinesin heavy chain signature 474 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu9g00118 872 PRINTS Kinesin heavy chain signature 271 292 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu9g00118 872 PRINTS Kinesin heavy chain signature 424 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu9g00118 872 PRINTS Kinesin heavy chain signature 381 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu9g00118 872 MobiDBLite consensus disorder prediction 710 729 - -
Lapu9g00118 872 PANTHER KINESIN-RELATED PROTEIN 6 18 869 IPR027640 GO:0003777|GO:0007018
Lapu9g00118 872 MobiDBLite consensus disorder prediction 599 618 - -
Lapu9g00118 872 Gene3D Kinesin motor domain 168 527 IPR036961 -
Lapu9g00118 872 ProSiteProfiles Kinesin motor domain profile. 190 524 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu9g00118 872 SMART kinesin_4 188 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu9g00118 872 FunFam Kinesin-like protein 169 527 - -
Lapu9g00118 872 MobiDBLite consensus disorder prediction 625 781 - -
Lapu9g00118 872 MobiDBLite consensus disorder prediction 524 561 - -
Lapu9g00118 872 MobiDBLite consensus disorder prediction 528 561 - -
Lapu9g00118 872 MobiDBLite consensus disorder prediction 161 181 - -
Lapu9g00118 872 MobiDBLite consensus disorder prediction 648 671 - -
Lapu9g00118 872 MobiDBLite consensus disorder prediction 746 781 - -
Lapu9g00118 872 Pfam Kinesin motor domain 196 523 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu9g00118 872 Coils Coil 788 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00118 Lapu-Chr9 1089821 1099294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00118 176 524 Calmodulin-binding Proteins AT5G65930 34.626 1.18e-43 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00118 K10393 - gmx:100800014 1516.52