Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00101 ATGGCTGAACACGGAAGAGATGAAGCGACACAGCAATTCAAAGAGAGAAGTCCAATCCCTCAAGATTTCGACGAGAAGAGTTACAGTCTCAGCGGAAAAATCATGCTCTCCGCGATCGTTCTACTCTTCTTCGTCGTCATTTTAATGCTCTGTCTCCACATCTATGCGCGCTGGTACCTCAGACGCGCGCGCCGCCGCCAACTCCGCGGTCATCGCCAGCTCCGCCGCACTCAGCTCGTATTCTACAATGACAGCGCCACCCCTGCCGCTTTCTCACGCGGTCTCGACGCCACTGTGCTCGCCTCGCTTCCTGTCTTCACTTACGACAAAAGGACACACCCGGAAAACGCGCCGGAATGTGCGGTTTGCTTGTCGGAGTTCGAACCGGGGGAACCGGGTCGGGTTTTACCGAAGTGTAACCACAGCTTCCACACTGAGTGCATCGACATGTGGTTCCACTCTCACTCCACGTGTCCACTTTGTCGCGCACCGGTTGAGTGCGCGGCCGAACCGGAAGTTGTTATAACTGTTATCGAACCTGAACCAGGTTCGGGTGAGAATCGAACCGGTTCTACATCTTCTCCTTCCTCTTCGGTTGGTTCGAGGAAAACTTCGATGATTGGTGTGAGCGTTGAGGTGCCTGCGCGGGACGAGAATTTTCGGGACGAAAATTCGTCGTCGTTTCGATCGCCAATGAGTCGCATGTTGTCGTTTACGAGGATTCTGAGCAGGGAACGGAGGGGGAACGTGTCGCCGTCGTCTTGCGGTGGTGATTGTAGCTCCGCCGCCCAGTGCGACGCGGAGCGAGGTGGGCGAGAGGAGACCCAGTGA 831 0.5596 MAEHGRDEATQQFKERSPIPQDFDEKSYSLSGKIMLSAIVLLFFVVILMLCLHIYARWYLRRARRRQLRGHRQLRRTQLVFYNDSATPAAFSRGLDATVLASLPVFTYDKRTHPENAPECAVCLSEFEPGEPGRVLPKCNHSFHTECIDMWFHSHSTCPLCRAPVECAAEPEVVITVIEPEPGSGENRTGSTSSPSSSVGSRKTSMIGVSVEVPARDENFRDENSSSFRSPMSRMLSFTRILSRERRGNVSPSSCGGDCSSAAQCDAERGGREETQ* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00101 276 MobiDBLite consensus disorder prediction 179 276 - -
Lapu9g00101 276 Pfam Ring finger domain 119 162 IPR001841 -
Lapu9g00101 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 170 IPR013083 -
Lapu9g00101 276 MobiDBLite consensus disorder prediction 244 260 - -
Lapu9g00101 276 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 24 170 IPR044675 -
Lapu9g00101 276 SMART ring_2 120 161 IPR001841 -
Lapu9g00101 276 MobiDBLite consensus disorder prediction 185 205 - -
Lapu9g00101 276 CDD RING-H2_EL5-like 119 162 - -
Lapu9g00101 276 FunFam RING-H2 finger protein ATL3 86 167 - -
Lapu9g00101 276 SUPERFAMILY RING/U-box 100 166 - -
Lapu9g00101 276 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00101 Lapu-Chr9 940632 941904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00101 14 273 Rapid Response to Elicitors AT3G16720 49.502 1.57e-70 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00101 - - gmx:100791545 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00101 9 940632 941904 Lapu9g00101 9 940632 941904 ECH