Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00099 ATGGTAGCAGTGGTTTCTGATGCAGCCGAAGCAAAAGTAGAAGCAGCTGACACAGAAGGAGGAGAAGGAGGAGCGAGTGGCACGACTACCTTAAGCACTCAGACCACGGGAGGTTCAATTTGCCAATCAACTCAGCACAAAGAAATGTGTGAGCAAAGCCTTGGGAGTTCACTTTTGAAAGTCACAGACCCGAAGAAGCTCCTCAAAGCTGGGTTCAATGCCTCGGTGGTGGAACTGTTAGGCAAAATAAACAACTCTACCCTTTACAAGGAGATGGCCGTAGACGATATGACGAAACAAGCTATGGATGTCTGCACGGAAGTTTTGGACTATGCAGTTGAACGCATTCTGAAATCTACTGAGATATTGGACACTGTTGAATTTAACAAGTTGGGAGGACATATTTTTGATCTCAAGGTTTGGCTCACGGGGAGTATGGCTCACCAATACACTTGCTTGATGGGGTTTGAGAACATAAAAAAAGATGAAAACATTAGTAAGGGAATGAGTCATGTTCTTCGTGCCTCTTTGGAGCTCACTAGCAATGCGTTGGATATGACCAACACGATCCAGAAGATGCTCAAAGGTTTTCAAGGGACTAAGCTTGCCAATAGGAGACTTCTCAATCCTGAAGCACCTCTTCCAGATGGTTTCCATTCGTGGGTTGGTGAAGGGGAACGACGTTTTCTCGGGGCTTCAGGCCAAAATGCTAATGCAGTTGTGGCCCAAGATGGCTCTGGCAACTTCAAGACAGTAGCTGAAGCTCTTAAGACTGTTCCTGCTAATAATGATAAACCTTTCGTCATTCATGTCAAGGCTGGTACGTACAAGGAAAAAGTGGATGTTTCCAAGGCCATGCGCTATGTCACAATTGTTGGAGATGGTCCTACAAAGACTATATTCACCGGCAGTTTAAACTATGTTGATGGTGTCAATACTTTCAACAGTGCTACCTTCGCTGTTCATGGTCACTACTTCGTTGGCAAGAACATTGGAATTGAAAACACAGCAGGAGCTGAGAAAGAACAAGCTGTGGCACTTATGGTAACAGCAGACAAAGCTGTGCTGCACAATGTCCATGTGGACGGGTTCCAAGACGCTCTCTTCGCACAATCCCAGCGCCAATTCTACCGTGATTGCACCGTTAGTGGCACCATTGACTTTGTCTTTGGGGATGCCTTTGGAGTGTTCCAAAACTGCAAATTCATTGTGAAAAAACCCAAGGAAGGGACAAAAAACATGGTGACAGCAGGTGGCAGATCGAAAGCAGACAGTGATAGTGCCTTGGTGTTTATAGGTTGCCAGTTCACAGGGGTTGCCGAAATGATTTCTGCAAACCCTAAGCTGGCATTCCTTGGAAGACCATGGCATCCATACGCTAAGGTGGTCATCATGGACTCTCAGATTGATAGCGCGTATGACCCAGAAGGGTGGGAGGCATTCTTGGGAGTGAAAAACAAGGACACATGCTCTTATTATGAGTACAACAACAAGGGTACTGGTGCTGACCCATCAAAGAGGGTTAAATGGAAAGATGTTAGGGTCATATCCTCTGCTGAAGCAGCTAAGTATTACCCTGGCAAGTTTTTCGAAGCTGCTAATTCAGCTGATGGTGATAGTTGGATTGTTAATACTGGTGTACCCTACTCTGTCAGTGCTAGCGGTTAA 1668 0.4568 MVAVVSDAAEAKVEAADTEGGEGGASGTTTLSTQTTGGSICQSTQHKEMCEQSLGSSLLKVTDPKKLLKAGFNASVVELLGKINNSTLYKEMAVDDMTKQAMDVCTEVLDYAVERILKSTEILDTVEFNKLGGHIFDLKVWLTGSMAHQYTCLMGFENIKKDENISKGMSHVLRASLELTSNALDMTNTIQKMLKGFQGTKLANRRLLNPEAPLPDGFHSWVGEGERRFLGASGQNANAVVAQDGSGNFKTVAEALKTVPANNDKPFVIHVKAGTYKEKVDVSKAMRYVTIVGDGPTKTIFTGSLNYVDGVNTFNSATFAVHGHYFVGKNIGIENTAGAEKEQAVALMVTADKAVLHNVHVDGFQDALFAQSQRQFYRDCTVSGTIDFVFGDAFGVFQNCKFIVKKPKEGTKNMVTAGGRSKADSDSALVFIGCQFTGVAEMISANPKLAFLGRPWHPYAKVVIMDSQIDSAYDPEGWEAFLGVKNKDTCSYYEYNNKGTGADPSKRVKWKDVRVISSAEAAKYYPGKFFEAANSADGDSWIVNTGVPYSVSASG* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00099 555 SUPERFAMILY Pectin lyase-like 236 550 IPR011050 -
Lapu9g00099 555 MobiDBLite consensus disorder prediction 13 39 - -
Lapu9g00099 555 ProSitePatterns Pectinesterase signature 1. 263 282 IPR018040 -
Lapu9g00099 555 Pfam Pectinesterase 238 530 IPR000070 GO:0030599|GO:0042545
Lapu9g00099 555 CDD PMEI-like_3 39 190 - -
Lapu9g00099 555 SMART PMEI_2 32 186 IPR006501 GO:0004857
Lapu9g00099 555 MobiDBLite consensus disorder prediction 23 39 - -
Lapu9g00099 555 Pfam Plant invertase/pectin methylesterase inhibitor 39 186 IPR006501 GO:0004857
Lapu9g00099 555 PANTHER PECTINESTERASE 39 543 - -
Lapu9g00099 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 190 IPR035513 -
Lapu9g00099 555 FunFam Pectinesterase 4 235 553 - -
Lapu9g00099 555 Gene3D - 233 553 IPR012334 -
Lapu9g00099 555 NCBIfam pectinesterase inhibitor domain 39 189 IPR006501 GO:0004857
Lapu9g00099 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 192 IPR035513 -
Lapu9g00099 555 ProSitePatterns Pectinesterase signature 2. 382 391 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00099 Lapu-Chr9 926609 928440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00099 39 549 Carbohydrate Esterase AT5G49180 41.762 1.90e-138 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00099 K01051 - gmx:100785214 653.669