Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00093 ATGGCTACGGAGCAGTTAATGTCCAGTGGCGGCCCTCGCTACGTTCAGATGAAATTGTCGCCACCACCGTCGCCGCCGGCTGCGGCTCCCGAGGAGATGTCATCGGTTCCATCGTTCCGGCACAGCGGCGCTGAGGCCAATCGGATTTTCGAGGAATTGCCGAGAGCCTCCATCGTCTCCGTGTCTCGCCCCGACGCCAGCGATATCAGCCCCATGCAACTCTCTTACACCATTCAGGTTCAGTACAAACAGTTCAAGTGGGAGCTAATGAAGAAAGCTCATCAAGTATTTATTTTGCATTTCGCATTAAAGAAACGTGCCATCATTGAGGAAATCCACGAGAAGCAGGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACAATGCTATGGAGCAAGATGACGATGAAGTTGATGATGAAACAATCCCGTTGCATAGTGATGAAACTCATGAAAGTGCTAAGCACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATACGGCCAGCCTTGGGAAGACAGCAGTCTATTGCAGAAAGGGCAAAGAGAGCAATGCAAGGATATTTGAATCACTTTTTGGGAAATATCAGTATTGTGAACTCTCATGAGGTTTGCAAGTTTTTGGAGGTGTCAAAGTTATCTTTTTCACCTGAATATGGCCCTAAGCTAAAGGAAGAATATGTGATGGTGAAGCATCTGCCCAAAATCCAGAAGGATGATGATTCCAGAAAGTGTTGTTTGTCTGACTGTTTCAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTTTTGGCATTGCTAGCAGATCCTTTTGATACACAGCCTCTGGACATAATTGTTTTTGACGTACTGCCTGCCTCGGATGGGAATGGGGATGGTCGCTTGTCACTGGCGAGTGAAATGAAGGAACGGAATCCATTACGCCATTCATTCAAGGTGGCTTGTGGAATCCGCAGTATCAGAATTAGAGTGAAAAGCAGAAGTAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTTAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGATATGGTTCATTTGCTCCTCCAAGAGGCTTAGTTGAAGATGGAAGTCAAGCCCAGTGGTTTATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGCTGCTAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAGCTGTATCTACGGCGACCTTTTCACACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGGAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTATCGATAACCATGTTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCCGAGCATAAAGTGGGAGATTTCCCTCCTCTAGTCTGGCCGGGAAAAGATTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGCCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAGAGGAACAAAGCTCCATATGAACAAGCGATACCATTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCCGAGAGATACAGATTGAAAGTGGGAACATAGACAATCAAAGAGTTCTTAAAAGAGAAGATTCTTTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCCCAGGAGTCTGATGGGTTGGATACTCATGAAGGTGACGAAAAATTGAATGGTGTAATCTCCTCTCCACATCACCTAGACAAGCCAAGAAGGATCAGCAGTGGTCTTCCCTTTTCATTCCGCAAGGCCAAAATTGTAGCAGTTAGTCCAGATACACCAATGAAGGGCTTTGTAGATGACCTAGATTCTGAGCATGATCGTGAGAAAATGTCTCTAGTGGCTCATTCCGATTTGCAAAATACAGATCCAGAATGGTGGGAGACGCAAGAACGGGGTGACCAGGGAGGTTTTCCTGAGGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGCCGTTGCCAGGTTATTAGGAGTGTGAGTCAATGGTCTGCTGGAACAAGTCAAACCGAAGAGAGCATCCACAGTGCTTATTGTTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCTGGGGATGAGATGATAAGGAATCGTGTGTTAGAAGCTTTATATCGTAGAATTATGCGAGCTTACAATGACAAAAAGTCTTTCAGGGTTATAATTGTCATACCACTGCTGCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGGGGGCCGAATTCTATCTTGCATAATCTTTATGAACTTCTTGGCCCTAAAATACACGACTACATCTCTTTTTATGGCCTAAGGTCTTATGGTAGACTTAACGGGGGCCTTGTGGCAACCAGTCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATAACTTTGATTGGGTCTGCTAATATCAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGCCATAGTGATAGAAGACAGAGAGTTGATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCTGGAAAGTTTTCCTTGAGCCTCCGATTGTCATTATGGTCTGAGCACTTGGGTCTCCCTACAGGCGAGGTCAATCAAATAATGGACCCAGTTGTTGAATCTACTTATAAGGATATTTGGACGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATTTGATACACACCAGACATGCCTTCAGGCAAAGTGTGGCTTTTTGGAAAGAAAAGATTGGTCACACGACCATTGATTTAGGAATAGCCCCTGAAAAATTGGAATCCTATCGTGATGGAGGCATTAAGAACACCGATCCGTTGGAGAGATTAGCATCAGTGAAGGGTCACCTCGTCTCTTTTCCCTTGGAGTTCATGTGTCAGGAAAGTCTGAGACCTGCTTTCAATGAAAGCGAATACTACGCTACTCAAGTTTTCCATTGA 3363 0.438 MATEQLMSSGGPRYVQMKLSPPPSPPAAAPEEMSSVPSFRHSGAEANRIFEELPRASIVSVSRPDASDISPMQLSYTIQVQYKQFKWELMKKAHQVFILHFALKKRAIIEEIHEKQEQVKEWLQNLGIGEHNAMEQDDDEVDDETIPLHSDETHESAKHRDVPSSAALPIIRPALGRQQSIAERAKRAMQGYLNHFLGNISIVNSHEVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDDDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEMKERNPLRHSFKVACGIRSIRIRVKSRSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLVEDGSQAQWFIDGRAAFEAIASSIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEGKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHVCFIGGLDLCFGRYDTSEHKVGDFPPLVWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGRSREIQIESGNIDNQRVLKREDSFSSSSQDQDIPLLLPQESDGLDTHEGDEKLNGVISSPHHLDKPRRISSGLPFSFRKAKIVAVSPDTPMKGFVDDLDSEHDREKMSLVAHSDLQNTDPEWWETQERGDQGGFPEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHSAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGPNSILHNLYELLGPKIHDYISFYGLRSYGRLNGGLVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIAIVIEDRELIGSYMDGKPWKAGKFSLSLRLSLWSEHLGLPTGEVNQIMDPVVESTYKDIWTATAKTNTTIYQDVFSCVPNDLIHTRHAFRQSVAFWKEKIGHTTIDLGIAPEKLESYRDGGIKNTDPLERLASVKGHLVSFPLEFMCQESLRPAFNESEYYATQVFH* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00093 1120 Coils Coil 105 125 - -
Lapu9g00093 1120 SUPERFAMILY Phospholipase D/nuclease 758 967 - -
Lapu9g00093 1120 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 487 514 IPR001736 GO:0003824
Lapu9g00093 1120 CDD PH_PLD 203 350 - -
Lapu9g00093 1120 CDD PLDc_vPLD1_2_yPLD_like_2 778 961 - -
Lapu9g00093 1120 Gene3D - 255 352 IPR011993 -
Lapu9g00093 1120 PIRSF PLD_euk 620 1120 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lapu9g00093 1120 PIRSF PLD_euk 31 624 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lapu9g00093 1120 MobiDBLite consensus disorder prediction 637 667 - -
Lapu9g00093 1120 SUPERFAMILY PH domain-like 258 350 - -
Lapu9g00093 1120 CDD PLDc_vPLD1_2_yPLD_like_1 380 524 - -
Lapu9g00093 1120 SUPERFAMILY Phospholipase D/nuclease 335 607 - -
Lapu9g00093 1120 MobiDBLite consensus disorder prediction 1 38 - -
Lapu9g00093 1120 Gene3D Endonuclease Chain A 374 609 - -
Lapu9g00093 1120 FunFam Phospholipase 752 971 - -
Lapu9g00093 1120 Pfam Phospholipase D Active site motif 487 514 IPR001736 GO:0003824
Lapu9g00093 1120 Gene3D Endonuclease Chain A 746 976 - -
Lapu9g00093 1120 Pfam PLD-like domain 791 964 IPR025202 -
Lapu9g00093 1120 SMART pld_4 917 944 IPR001736 GO:0003824
Lapu9g00093 1120 SMART pld_4 487 514 IPR001736 GO:0003824
Lapu9g00093 1120 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 917 944 IPR001736 GO:0003824
Lapu9g00093 1120 PANTHER PHOSPHOLIPASE D 164 1110 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00093 Lapu-Chr9 818425 832020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00093 1 1001 Phospholipase D Gene Family (Wang group) AT3G16785 73.016 0.0 1398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00093 K01115 - gmx:100780514 2140.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00093 9 818425 832020 Lapu9g00093 9 818425 832020 ECH