Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00091 ATGGGGCAAGAATCAGATTACAAAACCCAGTTGGTATTGGAGGTTTGCTCCATTTCCACCCGTTCAGTTGTGTGTGTTCATACACTTGTCTCAAACCCAGCTAAGCCACCTTTCATAGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTAGTCACCATCCGCCACCAATACCATAAACTTGCCCTGCAACTTCATCCGGACAAGAATAAACATCCAAAGGCTGAAATTGCATTCAAGCTTATATGCGAGGCATATATGTGTCTGTCTGATGCTACAAAAAGGAAAGCTTTTGACCAAAAGAGATATAATAATTTCTGCTTTGAGTGCAATAGAATTCCCTATACATCCAAAAAAGCCCCTGTCCCTGGCAATTCCTATGGCTCAAGTTTGAATACACGGAATAACATTAGTGGGTCAAGATCTTACAAAGTTTGGAGAAATATTAAGGAGATGAGAGAAAGGCTGAAGGAGGAGGCTAAGGTGATAGAGAACTGTCTGCGAGCAAATTTGATGTCAAAGAAAGAATCGCCCCTCTACAATCCAGCAGATTATAGACATGGAAGTAGGTTCCAGCATAAAGTTGAGAGAGAACTCCCTGTTTTCAATCCAATGAAATATTTGTACCAAGGGTATCCTCATCTGAGGGGCAATGTTCACAAGAATTGTGATGCATGTTGGTTCTTGCATACACAAAATCTTGTGCAGAATGACAAGGGGGGAGCTAAGTATACCTCCCCGGTATTTGAGGTCAGATCACAAAGTAAATTTGCTTATGACCCATCA 792 0.4154 MGQESDYKTQLVLEVCSISTRSVVCVHTLVSNPAKPPFIDWYCILGVEENAGVVTIRHQYHKLALQLHPDKNKHPKAEIAFKLICEAYMCLSDATKRKAFDQKRYNNFCFECNRIPYTSKKAPVPGNSYGSSLNTRNNISGSRSYKVWRNIKEMRERLKEEAKVIENCLRANLMSKKESPLYNPADYRHGSRFQHKVERELPVFNPMKYLYQGYPHLRGNVHKNCDACWFLHTQNLVQNDKGGAKYTSPVFEVRSQSKFAYDPS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00091 264 SMART dnaj_3 39 96 IPR001623 -
Lapu9g00091 264 Pfam DnaJ domain 40 101 IPR001623 -
Lapu9g00091 264 SUPERFAMILY Chaperone J-domain 28 107 IPR036869 -
Lapu9g00091 264 Coils Coil 151 171 - -
Lapu9g00091 264 PANTHER BNAC03G44070D PROTEIN 21 177 - -
Lapu9g00091 264 CDD DnaJ 40 93 IPR001623 -
Lapu9g00091 264 PRINTS DnaJ domain signature 60 75 IPR001623 -
Lapu9g00091 264 PRINTS DnaJ domain signature 42 60 IPR001623 -
Lapu9g00091 264 PRINTS DnaJ domain signature 76 96 IPR001623 -
Lapu9g00091 264 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Lapu9g00091 264 Gene3D DnaJ domain 39 162 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00091 Lapu-Chr9 801408 802672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00091 40 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.939 1.91e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00091 - - gmx:100778573 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00091 9 801408 802672 Lapu9g00091 9 801408 802672 ECH
Lapu3g00297 3 2994952 2996275 Lapu9g00091 9 801408 802672 PCT