Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00079 ATGTCCATGCATGTCCAGGTCTTCTTCTTCTTCTTAATCGTTGCCATCTTTTCCGTAACGCCGTCGATGTCTCAGTCGCAAACCGCAGCTTCCTGCAACGGAATATTCGTGTCGTACGTCTACAATGGCGGCGAGCGGCTGCCGCCGAATGTTTCCGACACGGCGGAGCAGCCATACCGGTTCGAGTCGACGCTGACAGTGCTGAACAACGGGTTGGAGGAGCTGAAATCTTGGAAGGTGTTCGTGGGGTTTCAGCACAGCGAGTGGTTGGTGTCGGCGTCGAACGCGGTGCTTGCTGACGGAACGAGTCTTCCCGGTGCGGTTGGGAACGGCACCGTGTTGAGTGGGTCGACGGTGAAGGATCTGAAGACAGCAGTGGCGACCGCCGGCGACTTGACCCAGATGCAGGTTCAGGTGGAGATGGTGGGGAGCTTGCTTGGGGTGGCGCCACCTTCTGTGCCGATGCCTCTCTCGGTTACTTTGGCTAATGATGGATTCGTGTGTGGTCAACCCTCTGGTGAAGGGAGCAATGAAACTCATGTCTGTTGCACAAGGGATCCCAATTTCAAAACAAACATCAGCACAGAGGAAGAGTTCCTTCCCCGTCAGAAGGGTGACCTCAGCATCACATACGACATCATCAGAACCTACGATTCCAATTACTGGGCAGAGGTTACAATCGAAAACCAGAACCCCTTAGGCCGTCTTGACGACTGGAGACTAAGCTGGGACTGGCAAAACGACGAGTTCATCTACACAACAAAGGGTGCATATCCATTAAACGTGGATTCCTCTGACTGTGTTTTCGGTTCTCAAGGTGATTTCTACAAGGAACTTGACTTTGCCAACGTGCTGAACTGTGAAAGAAGGCCAACAATAGTGGATCTTCCTCCGTCAAGGTTCAATGATTCAGAACTTGGTCAAATCCCATTTTGCTGCAGGAATGGCACCATCTTGCCGCCAACAATGGACCCCAGCATGTCAGCTTCAAGGTTCCAAATGCAAGTGTTCAAAATGCCACCCAACCTTAACCGTTCCACGCTCACACCACCTCATAACTGGGAGATAAAGGGTACCCTTAACCCTGACTATGAATGTGGCAACCCTATTAGGGTTAGTCCAAGTGAATCCCCCGACCCTAGTCACCCTCCATCAAACAAATCATCAATTGCAAGTTGGCAAGTGGTGTGCAACATCACTAACACAAAACGTGAAACACGCAAGTGCTGTGTTTCTTTCTCAGCTTATTACAATGAATCGGTTATTCCATGCAATACGTGTGCATGTGGATGTCCAAGTAACCCGGAGAGAACCTGCACTGCAACTTCACAAGCCATGTTGCTTCCACCAGAGGCACTTCTTGTCCCTTTTGAGAACCGAACTGAGAAGGCCGTTTCTTGGGCTGAGATAAAACATTTATCTGTGCCTAATCCCATGCCTTGTGGTGATAACTGTGGTGTGAGCATAAACTGGCACGTGGCTACGGATTACCGCAAAGGCTGGAGCGCGAGGGTGACACTTTTCAACTGGGGTGAGACTAGTTTTGCTGACTGGTTTGCTGCAGTGCACATGGACAAAGCTGCAAAGGGGTTTGAGGAAGTGTACTCGTTCAATGGAAGCCTTTTGGAGAGTGTAGAAAACACGATATTCATGCAAGGGAAAGAGGGGTTGAATTTTCTTGTGGCGGAAACGGATGGATCTAACCCTCGTAGAGATCCTAGGGTGCCGGGGAAACAGCAATCAGTGATCTCGTTTACGAAGAAGGAGACTCCTGAAATCAATGTGGTTGGTGGTGATGGGTTTCCAAGTAAAGTGTTCTTCAATGGGGAGGAGTGCTCTCTTCCTTCGGTGTTACCAAGCAGTGTTGCGAGAAAGGAGGTTTCATTGGCTACTGCGATGTTCCTAGTGACGTTTTTGTCAATCATCTTCATGTCGCAATAG 1941 0.4987 MSMHVQVFFFFLIVAIFSVTPSMSQSQTAASCNGIFVSYVYNGGERLPPNVSDTAEQPYRFESTLTVLNNGLEELKSWKVFVGFQHSEWLVSASNAVLADGTSLPGAVGNGTVLSGSTVKDLKTAVATAGDLTQMQVQVEMVGSLLGVAPPSVPMPLSVTLANDGFVCGQPSGEGSNETHVCCTRDPNFKTNISTEEEFLPRQKGDLSITYDIIRTYDSNYWAEVTIENQNPLGRLDDWRLSWDWQNDEFIYTTKGAYPLNVDSSDCVFGSQGDFYKELDFANVLNCERRPTIVDLPPSRFNDSELGQIPFCCRNGTILPPTMDPSMSASRFQMQVFKMPPNLNRSTLTPPHNWEIKGTLNPDYECGNPIRVSPSESPDPSHPPSNKSSIASWQVVCNITNTKRETRKCCVSFSAYYNESVIPCNTCACGCPSNPERTCTATSQAMLLPPEALLVPFENRTEKAVSWAEIKHLSVPNPMPCGDNCGVSINWHVATDYRKGWSARVTLFNWGETSFADWFAAVHMDKAAKGFEEVYSFNGSLLESVENTIFMQGKEGLNFLVAETDGSNPRRDPRVPGKQQSVISFTKKETPEINVVGGDGFPSKVFFNGEECSLPSVLPSSVARKEVSLATAMFLVTFLSIIFMSQ* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00079 646 Pfam COBRA-like protein 221 400 IPR006918 GO:0010215|GO:0016020
Lapu9g00079 646 MobiDBLite consensus disorder prediction 367 388 - -
Lapu9g00079 646 PANTHER COBRA-LIKE PROTEIN 7 23 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00079 Lapu-Chr9 719305 721330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00079 32 629 COBRA Gene Family AT4G16120 64.842 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00079 - - vum:124836920 1204.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00079 9 719305 721330 Lapu9g00079 9 719305 721330 ECH
Lapu3g00314 3 3131290 3133404 Lapu9g00079 9 719305 721330 PCT