Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00076 ATGTCCGAAGGAACCAGCTTGGTGCTGGAATCATCTGAAAATGGCACAGATTTGTCTCAGGATGACATTGACACCATCGAGGAAACAGCAGAGGAAACAATTTTGTCAAGACAAACTTCTGTCAACCTTGTTCCTTTTATTGGTCAAAGATTTGTATCTCAAGAAGCAGCTTATGAATTTTATTGTAGTTTTGCTAAACAGTGTGGCTTTTCAATTAGACGGCACCGGACTCGAGGGAAAGATGGGGTCGGAAGGGGAGTTACGAGGAGGGATTTTACTTGCCATCGTGGTGGTTATCCCCAGATTAAACCTTCTGACGACGGAAAGGCGCAAAGGAACCGCAAATCATCCCGCTGTGGTTGCCAAGCATACATGCGTATTGTGAAAAGGGCAGATTTTGACGTCCCTGAATGGCGCGTTACTGGTTTTAGGAACATACACAATCATGAGTTATTAAAATCCAATGAGGTGCGCCTTCTTCCAGCGTATTGTCCGATATCTCCTGATGACAAGAGTCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTAAGGCAGATGTTAAGACTGATGGAGCTAGAGAAAGGTGTCAAACTTGGTTGTCTTCCTTTTACAGAGATAGATGTAAGAAACCTGCTGCAGTCTTTCAGAAATGTGGATAGAGATAATGATGCCATTGATTTGATTGCTATGTGCAAGAGGTTAAAGGATGAAAACCACAACTTCAAATATGAATTCAAGATAGATAGTAATAACAGGCTTGAGCATATTGCATGGTCCTACAGTTCATCCATTCAATCATATGAGGCTTTTGGCGATGCTGTAGTTTTTGATACCACCTACCGAGTAGATGCTTATGACATGCTGTTGGGATTTTGGCTAGGTGTGGACAATAATGGCATGACTTGCTTCTTTAGTTGTGCACTTCTACGGGATGAAAACATACAGTCTTTCTCATGGGCTCTAAAGGCTTTCTTGGGGTTCATGAAAGGAAAGGCTCCACAAACAATATTGACAGATCACAATACATGGCTGAAAGAAGCTATTGCAGTTGAATTGCCTGAAACTAAACACGCCTTTTGTATATGGCATATTCTTTCTAAGTTCTCTGATTGGTTTTCTTTACTTCTTGAATCACAATATGATGAGTGGAAAGCTGAGTTCCACCGGCTCTACAATTTGGAACTGGTGGAAGATTTTGAAGAAGGCTGGCGGCAAATGGTTGATAAATATGGACTCCACACAAATAAACATATTATTAGCCTATATTCATTGAGGACATTTTGGGCTTTACCATTCTTGAGGCGCTACTTCTTTGCAGGATTGACTAGTACATGTCAGTCCGAGTCCATTAATGCTTTCATCCAACGTTTCTTGAGTGCCCAATCTCAACTAGACCGCTTTGTGGAGCAAGTGGCTGATATTGTTGATTTTAATGACCGAGCTGGAGCCAAGCAAAAGATGCAAAGGAAACTGCAGAAAGTGTGCCTCAAAACTGGTTCACCTATTGAATCCCATGCTGCCACTGTACTTACTCCTTCTGCCTTAAATAAACTTCAGGAAGAGCTAGTTTTGGCGCCACAATATGCATCCTTCCTGGTTGATGAAGGTTGTTTCCAGGTCAGACACCATTCTCAGTCAGACGGAGGGTGCAAAGTATTCTGGGTTCCTTGTCAAGAGCACATCAGCTGCAGCTGCCATCTGTTTGAGTTTTCAGGCATCTTATGTAGACATGTGCTACGTGTCATGTCAACTAATAACTGTTTTCACATCCCTGATCAATATTTGCCAGGCCGATGGCGTGGCCTCAGTTCTTCTTCTGTTAATCACTTCCGGGGTACCACTAGTAGGGATCAGCCTGAAAGGATGCAACTTTTGGAATCCATGGTTTCAACATTTTTAGTGGAATCCATTGAAACAGAGGAACGTCTGGATGTTGCTTGCGAGCAAATTGCCATGGTGCTATCACGCATCAAAACCCTTCCTAGATCTCCACATGGGGTGAATGACATTGCATTTAGTTACCCATCAGATTCATTAATCCTCCCAGATGTAGAAGATACTGATGGAATGATTCATGGCTTTACAATCACAAATCCCCATGATTCTATCACTACAGCAAAGCTCAAAGAAAAAAGAGCCAGAGATGGAGTCGATCTCACAAGGAAGCGCAGACAGTTTTCTGCGCCATTGTGTGCTCAATGTGGACATGATGCATCTGATTGCTCAATAATGGCGGCTGACAATATGAGTGCAGATGCATTAGGGTACTTGTAG 2277 0.426 MSEGTSLVLESSENGTDLSQDDIDTIEETAEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKAQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFRNIHNHELLKSNEVRLLPAYCPISPDDKSRICMFAKAGMSVRQMLRLMELEKGVKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHNFKYEFKIDSNNRLEHIAWSYSSSIQSYEAFGDAVVFDTTYRVDAYDMLLGFWLGVDNNGMTCFFSCALLRDENIQSFSWALKAFLGFMKGKAPQTILTDHNTWLKEAIAVELPETKHAFCIWHILSKFSDWFSLLLESQYDEWKAEFHRLYNLELVEDFEEGWRQMVDKYGLHTNKHIISLYSLRTFWALPFLRRYFFAGLTSTCQSESINAFIQRFLSAQSQLDRFVEQVADIVDFNDRAGAKQKMQRKLQKVCLKTGSPIESHAATVLTPSALNKLQEELVLAPQYASFLVDEGCFQVRHHSQSDGGCKVFWVPCQEHISCSCHLFEFSGILCRHVLRVMSTNNCFHIPDQYLPGRWRGLSSSSVNHFRGTTSRDQPERMQLLESMVSTFLVESIETEERLDVACEQIAMVLSRIKTLPRSPHGVNDIAFSYPSDSLILPDVEDTDGMIHGFTITNPHDSITTAKLKEKRARDGVDLTRKRRQFSAPLCAQCGHDASDCSIMAADNMSADALGYL* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00076 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 605 IPR031052 GO:0006355
Lapu9g00076 758 SMART 26again6 562 589 IPR006564 GO:0008270
Lapu9g00076 758 MobiDBLite consensus disorder prediction 1 22 - -
Lapu9g00076 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Lapu9g00076 758 Pfam MULE transposase domain 275 367 IPR018289 -
Lapu9g00076 758 ProSiteProfiles Zinc finger SWIM-type profile. 554 587 IPR007527 GO:0008270
Lapu9g00076 758 MobiDBLite consensus disorder prediction 1 19 - -
Lapu9g00076 758 Pfam SWIM zinc finger 559 584 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00076 Lapu-Chr9 687785 692170 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu9g00076 MULE 3.2e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00076 - - vum:124836934 1470.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00076 9 687785 692170 Lapu9g00076 9 687785 692170 ECH