Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00075 ATGAGTGGTGCATCAGAAAACCCTACTCATGACAGTACTGAAGGTAAAGCTGCTGCTGCTTCTTCATCAACAACGTTGAAACTCTTCGGTTTTCCATTAACCCCACCAGGTTACAAAGAGATTCACGTAGCAGCAAGTAGTACTGTTACTCTTCATTGCCCTTACAAGAGATTCAAGTGCCACTTCTGCTACCGCGAATTCGCCAATTCACAAGCTCTCGGTGGCCACCAAAACGCTCACAAGAGAGAACGCCAAAAAGCTGCTCTCTCACCCTTCGGTTACTTTCACCACCATCAACGGTTCACAGCACCTAGTCATTCCCCGATTGTGGTTCCACACGGAGGATCAGGACCGTTGGTTGTTCGACGTGACGGGGGTCAACGACCGTGGCTCCCGAGGGACACTGGTGAGAAAGCTTATCATCATCGTAGGGTTGGGTTAGTGAGGCCAATGGGTGCAAGTGCAATTAGCATTGGCACAGTGAGGGAAGTACATAATGTTAGTGCTGGTGATGGTGATGGGGAATTAGGGATATCTCATCTCAGTCCTATACTAATTGCTCATGAATTTGAGGGGGTTAGGTTATGA 588 0.483 MSGASENPTHDSTEGKAAAASSSTTLKLFGFPLTPPGYKEIHVAASSTVTLHCPYKRFKCHFCYREFANSQALGGHQNAHKRERQKAALSPFGYFHHHQRFTAPSHSPIVVPHGGSGPLVVRRDGGQRPWLPRDTGEKAYHHRRVGLVRPMGASAISIGTVREVHNVSAGDGDGELGISHLSPILIAHEFEGVRL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00075 195 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Lapu9g00075 195 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
Lapu9g00075 195 SUPERFAMILY beta-beta-alpha zinc fingers 56 85 IPR036236 -
Lapu9g00075 195 PANTHER ZINC FINGER PROTEIN 5 16 92 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00075 Lapu-Chr9 674187 675051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00075 56 126 C2H2 Transcription Factor Family AT3G58070 47.297 2.46e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00075 - - vun:114162545 245.358