Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00048 ATGTCGGTCGCTGAAACTGCTTGTTCATACGCATCTCTCATCCTTCATGATGAAGGAATCGCCGTCACTGCCGACAATATCGTCACCTTGTTGAAAACTGCAAAGGTTCAAGTCGATTCTTTTTGGCCTGCCTTGTTTGCTAAACTTGCCGAGAAGAAAAATCTTGGCGATTTGATATCAAATGCTGCTGGCGGTGGGGGGGCACCAGTTGCTGTTGCAGCTGCCCCAGTTGCTGCTGCTGGTGGAGGTGCTGCGGCCGCACCTGCTGCTGAGGAGAAAAAGAAGGAAGAACCTGAAGAAGAGAGTGATGATGATATGGGATTCGGCTTGTTCGATTAG 339 0.4985 MSVAETACSYASLILHDEGIAVTADNIVTLLKTAKVQVDSFWPALFAKLAEKKNLGDLISNAAGGGGAPVAVAAAPVAAAGGGAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00048 112 CDD Ribosomal_P1 5 111 - -
Lapu9g00048 112 MobiDBLite consensus disorder prediction 97 112 - -
Lapu9g00048 112 Gene3D - 1 62 IPR038716 -
Lapu9g00048 112 MobiDBLite consensus disorder prediction 84 112 - -
Lapu9g00048 112 Pfam 60s Acidic ribosomal protein 22 111 - -
Lapu9g00048 112 Hamap 50S ribosomal protein L12 [rpl12]. 6 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lapu9g00048 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 112 - -
Lapu9g00048 112 FunFam 60S acidic ribosomal protein P1 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00048 Lapu-Chr9 400610 402955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00048 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 53.913 8.94e-37 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00048 K02942 - gmx:100791962 128.642