Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00038 ATGGCTAAAACGTTAGAAGTTGTGAATGGGGGAGAGGATCATCTTAAAAGGGAAGAAGAAGAGGAAGATGAGTTGACGTTTTGCATGGAAAAGATGGTTTCTTTTGTGGTTCCGATGGCTTTGAGGACATTGTTTGAGCTGGGGGTGTTTGATATCTTAGCCAAAGGTGACAAACTCTGTGCAAAAGAGATTGCAATTAAGATAGGGAGCAACAACCCTGAAGCTCCTGCAATGTTGGATCGTCTTCTTAGCCTTTTGGTTAGTCACTCTCTGCTATCTTGCTCTATCCCTCAACAAGAACCACACCCTCAGAGGTTCTACGCCCTCTCTCCTGCTTCCAGATATTTTGTTACTGATCCTCAAGGTGTATCATTGGGATCCGCCATCAGATTGCTTCTTGACCAAGTCTTCTACAAAAGCTGGAGCGAACTGAAAGGAGCAATCCTAGAAGGGGGTGTAGCATTCGACAGGGCCCATGGCATGAATGCTTTCGAATATCCACGTGTGGATCCCAGGTTTAACGAGGTTTTCAACAACGGTATGATAGGCCTCAGCACTGTAATTATGAAGAGGATTCTTGAGTTGTACAATGGTTTTGAGCATGTCACCAGGCTCATCGACGTTGGTGGAGGTTATGGGGTCAACATTAACTTGATCAAATCCAAACACCCTCACATTCAGGCTATTAATTTTGACTTGCCTCATGTCGTGGAAAATGCCCCCCTCCATTCAGGTGTGGAGTATGTGGGAGGAGACATGTTTGAGAGTGTTCCTTCAGGAGATGCCATTTTTATGAAGTGGGTACTTCATGATTGGAGTGATGAACAGTGCGTGAAGCTCTTGAAGAATTGCTACGGAGGAATTCCTGATGATGGAAAGGTCATTGTGGTGGACTCAATTCTGTCGATGGTGCCTGAAACAAGTGGTACTGCTAAGAGTGCTTCAGGATCTGACCTCATAATGATGACTCAAAACCCAGGAGGGAAAGAACGAACGCGTCAACAATTCATAGAACTGGCAGAAGCATCTGGGTTTAGTGGGGTCAAATTCATATGCTGTGTGTGTGGCAACTGGGTCATGGAGTTCTACAAGTAA 1095 0.4511 MAKTLEVVNGGEDHLKREEEEEDELTFCMEKMVSFVVPMALRTLFELGVFDILAKGDKLCAKEIAIKIGSNNPEAPAMLDRLLSLLVSHSLLSCSIPQQEPHPQRFYALSPASRYFVTDPQGVSLGSAIRLLLDQVFYKSWSELKGAILEGGVAFDRAHGMNAFEYPRVDPRFNEVFNNGMIGLSTVIMKRILELYNGFEHVTRLIDVGGGYGVNINLIKSKHPHIQAINFDLPHVVENAPLHSGVEYVGGDMFESVPSGDAIFMKWVLHDWSDEQCVKLLKNCYGGIPDDGKVIVVDSILSMVPETSGTAKSASGSDLIMMTQNPGGKERTRQQFIELAEASGFSGVKFICCVCGNWVMEFYK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00038 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 363 IPR029063 -
Lapu9g00038 364 Gene3D - 8 116 IPR036388 -
Lapu9g00038 364 Pfam Dimerisation domain 39 87 IPR012967 GO:0046983
Lapu9g00038 364 Pfam O-methyltransferase domain 141 346 IPR001077 GO:0008171
Lapu9g00038 364 PIRSF O-mtase 9 364 IPR016461 GO:0008168
Lapu9g00038 364 CDD AdoMet_MTases 204 297 - -
Lapu9g00038 364 FunFam Caffeic acid 3-O-methyltransferase 9 116 - -
Lapu9g00038 364 Gene3D Vaccinia Virus protein VP39 118 364 IPR029063 -
Lapu9g00038 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 364 IPR016461 GO:0008168
Lapu9g00038 364 FunFam Caffeic acid O-methyltransferase 117 364 - -
Lapu9g00038 364 PANTHER O-METHYLTRANSFERASE 34 362 IPR016461 GO:0008168
Lapu9g00038 364 SUPERFAMILY "Winged helix" DNA-binding domain 19 119 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00038 Lapu-Chr9 359701 361371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00038 11 364 Monolignol Biosynthesis Gene Families AT5G54160 50.140 1.12e-126 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00038 K13066 - gmx:100789402 465.692