Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00037 ATGTACATATGTGGTACTCTTAGTAGAAGGTGGTATTGCAGGGTTGAAGTGGAGATGGCAAGCCTTCCAAATTCTAAGCTCAACGGCGAAGAGAAGATGAAGAAAGCAGAAGAAATAAAAGATGAAGAAAGCTTATCGTTGGCCATGCAGCTTGGGAGCTCCGTCGTGCTTCCGATGGCACTGCAATCGGCGACGGAGCTGGGTGTGTTTGATGTGCTGAAAGAAGCTGGTGAAGCTGCTAAGCTCTCTGCTAAGGATATAGCATCCAAGATTTCTTGCAGCAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCTCACTCCTTTCCTCTCACTCCATTCTCAACTCTTCCCTCATTTCCGACCACCATATCCCTCCCACCTTTCACAGGCTCTACACCATCACTCCCGTCGCCACATTCTTCGCTCGCAACTCTGATGGGGTTTCGTTGGGACCCTTGATGGCCTTGCTCCAAGACAAAGTCTTCCTACACAGCTGGACTGAGCTGAAAGATGCAATTCGGGAGGGGGGTGTTCCATTCGACAGGGCTCATGGCACTCATGCTTTTGAGTATCCAAGTTTGGACTCAAGGTTCAATGAAGTTTTCAACACGGCAATGATCAATCACACCACTTTAGTGATGAAGAAGATTTTGGAATCCTACAAAGGTTTTGAGAACATAAAAAAGCTGGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAACTTGATCACTTCCAAATACCCTCATGTCCAGGGCATCAATTTCGACTTGTCTCATGTCATTCAACATGCTCATTCCTATCCTGGAGTGGAACACGTTGGCGGAGATATGTTTGAAAATGTGCCTAAAGGAGACGCCATATTTATGAAGTGGATACTTCATGATTGGAGTGATGAACAGTGTGTGAAGCTGTTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAAGCACTTCTTCCAAAAATAGCAGAGACTAATGCTGCTTATAAGGCGGTTTCACAAATGGATGTTTTGATGATGACTCAAAATCCGGGAGGGAAAGAGCGATGTGAGCAAGAGTTCTTGGCATTGGCAACTGCAGCTGGATTTAGAGGCATCAGATATGAATGTCATGTCCACCTTTTCTGGGTTATGGAGTTCTTCAAGTAG 1173 0.4561 MYICGTLSRRWYCRVEVEMASLPNSKLNGEEKMKKAEEIKDEESLSLAMQLGSSVVLPMALQSATELGVFDVLKEAGEAAKLSAKDIASKISCSNPEAASMLDRLLSLLSSHSILNSSLISDHHIPPTFHRLYTITPVATFFARNSDGVSLGPLMALLQDKVFLHSWTELKDAIREGGVPFDRAHGTHAFEYPSLDSRFNEVFNTAMINHTTLVMKKILESYKGFENIKKLVDVGGGLGININLITSKYPHVQGINFDLSHVIQHAHSYPGVEHVGGDMFENVPKGDAIFMKWILHDWSDEQCVKLLKNCYDAIPDDGKVIVVEALLPKIAETNAAYKAVSQMDVLMMTQNPGGKERCEQEFLALATAAGFRGIRYECHVHLFWVMEFFK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00037 390 PIRSF O-mtase 25 390 IPR016461 GO:0008168
Lapu9g00037 390 Pfam O-methyltransferase domain 167 372 IPR001077 GO:0008171
Lapu9g00037 390 FunFam Caffeic acid O-methyltransferase 143 390 - -
Lapu9g00037 390 SUPERFAMILY "Winged helix" DNA-binding domain 41 145 IPR036390 -
Lapu9g00037 390 Gene3D Vaccinia Virus protein VP39 143 390 IPR029063 -
Lapu9g00037 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 388 IPR029063 -
Lapu9g00037 390 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 49 390 IPR016461 GO:0008168
Lapu9g00037 390 FunFam Caffeic acid 3-O-methyltransferase 25 142 - -
Lapu9g00037 390 Gene3D - 25 142 IPR036388 -
Lapu9g00037 390 PANTHER O-METHYLTRANSFERASE 48 375 IPR016461 GO:0008168
Lapu9g00037 390 Pfam Dimerisation domain 59 109 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00037 Lapu-Chr9 350072 353198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00037 38 390 Monolignol Biosynthesis Gene Families AT5G54160 52.528 3.62e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00037 K13066 - gmx:100803633 572.392