Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00035 ATGTCACGTATTGTCCTCCTGACTTTTGTTGGGCTTGTTGTGTGCTTCCCATTTTCCTGTTCCCTCCAAGAGCAAGGAAAAGAGCTACAAGCTCCTTTGCTTCCCAACTCTTGCAAAGAAACATGCGGGGACCTCCATGTTCCCTTTCCATTCTACGTCAACTCTTCTTGTGAGTCAATTTCCAGTGCCTTCCATCTCTCCTGCATAAATTCCTCTACCCTTTTGCTCAGAATTGGCTCAGTGAGCTACACAGTATTGGAATTCTTCCCAGATGGCGTGCTGGTGGACTTTCCCGGCTCCTCATCCTGTAGACAGTACAATGACTTGAATTCTTTTGGCAGAAGCTTTTCAGGCAAGGACAACTTTGGAGTCTCGGTTGACAATGTTATTGGTCTCTATGACTGTGAGGATTCCTCTCTGTGCAAAGCAGATTGTGAAACTATTGACTTGCCTGGTTGTGATGGAAGGGGTGGAGGCTCCCTTGCCTGCTGCTATCCACTCTCCGACCATACCATATGGCATGTTGGAGATGGATTTTCGGTGTTTTCTCAGTTTGGATGCAGGGGGGTTTCTAGTTGGGCCGTTTTGCGAGGCTCAACTTGGGGAAAACGTGGGGTCAAGTTGGAATGGGCACTGCCCAGAAACTCCTCTACGCAAGTTTGTGCAAGGAATGCTAACATGGCCAATGCTACAGCAATCGAAGGAGGCGTGAGATGTGTCTGTCAAAATGGATATGTCGGTGATGGTTTTGCTAATGGAACTGGATGTCTTCAGGCCTGCATAAAGGACGGAAAGGAAGCATATGGAAGTGACTGCTACATCAAAAGACATGATCAGAGGAAATTTGTCATCATTGCCGGAATCATTGGCCCAGTTCTGATTGTTGCCTCCCTGGTTGCACTATTTTATCTTCTTAAACGGCCAACAAAACCAGGGATGTTTGACACCGAGCAGGCTTACTATCAAAACCTTTCAATCCCCAAAGCTTGTAAAACTCGTTTATTCAGCCTCCAAGAGCTAGAGGAAGCCACTGAAGGTTTTGAAGAGGGTCAGAAACTTATGCATGGCAATAATGGGACAATTTTCGCTGGAGTTTTAGGGGATGGATCTCACATAGCTGTCCAGAAAGTACAATGTGAGAAGAAAGACTTGATTCAGGTCCTGTCACAGATCGAGGTTCTGTCTTCTATTGTGCATAGAAACATGGCCCGCATTCTTGGTTGCTGCATTGGATCTGGCAACACTCTGGTAGTTTATGAGTTTCCTTCCAATGGTACTCTGGAGGAGCATTTACATCAAAGCAAAGGACAACAACTTCCTTTAGACTGGTATAGGAGATTGACCATTGCTGCAGAAACAGCTAGCATTCTTGCATTCCTACACTACGAGAACTCTCCTCCCATATTTCACCGTAACCTTAAATCTGCGTGCATCTTCCTAGATGATGATTATTCTGTCAAGATTGCAGGATTTGGTCTGATCAACTCCCAATTTTACTATAGTTCTCAGTTACATAAGAACTATGAAGGCTTTGGCATCTGCAAAAATGATGTTTATGACATGGGTGTGTTGCTTCTTGAAATCATCTCAGGCTCAAATCGCTTGGATTTACCAACTTCGGCCATGCAGCAAATAAGGGCTGGAAAATTTGAAGAAATTTTTGACCCGTTTCTTTGCTACCATGAACAACCACATTATCGCCAAGAGCAAATGCAAATCATTGCCGATCTTGCTACAAGATGCCTGTTATTTGGTGTAGATGGAAGGCTAGGAATGGTAGATGTTGTGAGGGAATTAGTACACTTGACTAAAGAAAGTCTTGATGGAGGAATTACCAAAGGACCTGCACTGGAGGAGACATTCTCAAATTCAAGCCTTCTTCAGATGATATCAATGTCTCCTGACTCTATGAATGTCCCTTGA 1923 0.4441 MSRIVLLTFVGLVVCFPFSCSLQEQGKELQAPLLPNSCKETCGDLHVPFPFYVNSSCESISSAFHLSCINSSTLLLRIGSVSYTVLEFFPDGVLVDFPGSSSCRQYNDLNSFGRSFSGKDNFGVSVDNVIGLYDCEDSSLCKADCETIDLPGCDGRGGGSLACCYPLSDHTIWHVGDGFSVFSQFGCRGVSSWAVLRGSTWGKRGVKLEWALPRNSSTQVCARNANMANATAIEGGVRCVCQNGYVGDGFANGTGCLQACIKDGKEAYGSDCYIKRHDQRKFVIIAGIIGPVLIVASLVALFYLLKRPTKPGMFDTEQAYYQNLSIPKACKTRLFSLQELEEATEGFEEGQKLMHGNNGTIFAGVLGDGSHIAVQKVQCEKKDLIQVLSQIEVLSSIVHRNMARILGCCIGSGNTLVVYEFPSNGTLEEHLHQSKGQQLPLDWYRRLTIAAETASILAFLHYENSPPIFHRNLKSACIFLDDDYSVKIAGFGLINSQFYYSSQLHKNYEGFGICKNDVYDMGVLLLEIISGSNRLDLPTSAMQQIRAGKFEEIFDPFLCYHEQPHYRQEQMQIIADLATRCLLFGVDGRLGMVDVVRELVHLTKESLDGGITKGPALEETFSNSSLLQMISMSPDSMNVP* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00035 640 Gene3D Phosphorylase Kinase; domain 1 314 421 - -
Lapu9g00035 640 FunFam probably inactive receptor-like protein kinase At2g46850 319 421 - -
Lapu9g00035 640 SUPERFAMILY Protein kinase-like (PK-like) 329 599 IPR011009 -
Lapu9g00035 640 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 34 602 IPR045274 GO:0007166
Lapu9g00035 640 Pfam Protein tyrosine and serine/threonine kinase 349 502 IPR001245 GO:0004672|GO:0006468
Lapu9g00035 640 Gene3D Transferase(Phosphotransferase) domain 1 423 610 - -
Lapu9g00035 640 FunFam Putative WAK-related receptor-like protein kinase family protein 423 612 - -
Lapu9g00035 640 Pfam Wall-associated receptor kinase galacturonan-binding 38 88 IPR025287 GO:0030247
Lapu9g00035 640 ProSiteProfiles Protein kinase domain profile. 347 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00035 Lapu-Chr9 325859 328502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00035 38 602 Receptor kinase-like Gene Family AT2G23450 29.373 4.84e-60 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lapu9g00035 PK_Tyr_Ser-Thr 3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00035 - - gmx:100810557 1162.13