Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00028 ATGAGACCTCTCAGTCCCAGAGGAAGACCAACCCCATCAACATCACCGTCAACACCACCCTCTTCCATGTTCATGATTTCCAAGTTAATGGTCTTTGTCACACTGCTGTTTCCTCTGTCCGGGTTCCTTGTTCCTGTTCAAGCCTCCTCGTGTAACCAACTGGATAGAGACTCTCTCTTGGCCTTCTCCGGCAACATATCCACTCCTTCTCCTCTCAATTGGTCTGTTTCTGTTGATTGTTGTCTGTGGGAAGGCATTAAGTGTGATGAGGATTTCAGAGTCATACATCTGTTGCTACCATCCAGGGGACTCGCTGGCTTCATCCTCCCATCTCTCACAAATCTCACTGCTCTCTCCCGGCTCGATCTCTCCCATAATCGCTTATCTGGTAATCTCCCAAACCAATTTTTCTCACTTCTTAATCACCTGCAGATCCTTGATTTAAGCTACAATCGTCTCTCTGGTGAATTGCCACCCTTTGTTGCTAATATCAGTGGCAATACTATCCGGGAGCTTGATTTGTCCAGTAATTTATTCCACGGAAAACTCCCACCTTCTCTCCTTCAGCACCTGGCAGATGCAGTTGCAGGAGGGAGTTTGACATCTTTTAATGTTAGTAACAACAGCTTCATGGGTCAAATTCCCACTTCTCTCCTCTGCAGTAACCACAGTAGCTCCCCCTCTCTAAGATTCTTGGATTATTCTTCCAATGATTTCGCTGGCATGATTCAGCCTGGACTAGGAGCATGTTCCAGGCTGGAGAGATTTCGAGCAGGCTCCAATTCACTATCTGGGCCCCTTCCTGGTGATATCTTTAATGCTGTTGCTCTCAAAGAAATCTCCTTGCCCCTCAATAAACTCAGTGGAACCGTTGGTGAGGGCATTGTTAACCTTGCCAACCTCACAGTTTTGGAGCTCTACTCCAATAATTTCACCGGGCCCATTCCCTCGGATATTGGTAAGCTCTCCAAATTGGAACGTTTACTCCTTCATGCCAACAAAATAAATGGCACTCTGCCCCCATCTCTAATGAACTGTGTCAATCTTGTCATGTTGGATGTAAGGCTCAACTTGTTGGAGGGAAGCCTCGCAGCATTGAATTTCTCCGGACTCCTCAGACTCACAGCACTTGACCTTGGCAACAATAGTTTTACTGGTATTATACCACCGACTATGTATGCCTGTACATCACTTAAAGCAATAAGGCTGGCATCTAATCAGTTTGAGGGACAGATCTCACCTGATATACTTGGACTTCAGTCTCTGGCTTTCCTATCAATTTCCACCAATAACCTCAGTAATGTCACTGGGGCTCTGAGGTTGCTTATGGGACTCAAGAACCTTAGCACCCTTATGCTCTCCCAGAATTTTTTCAACGAAATTATGCCAGATGATGTGAACATAACAAATCCAGATGGATTCCAAAAGATACAAGTTCTAGGTTTGGGCGGTTGTAATTTCACAGGCCAAATACCTCACTGGCTTTATAATCTGAATAAGCTCGAGGTCTTGGATTTGTCCTATAATCAAATCAGTGGCTCAATTCCTCCCTGGTTACACGCACTTCCCGAGCTTTTCTACATAGACTTGTCTTTCAACCGCCTCACAGGAATGTTTCCAGCTGAGCTCGCAACGCTTCCAGCACTAACATCTCAACGGGCCTATGACGAAGTGGAAAGGACTTACCTGGAGTTACCCGTATTTGCTAATGCCAACAATGTGTCTCAGATGCAATATAATCAGATTTCCAACCTACCACCCGCCATATATCTCGGAAACAATAGCCTCAACGGCAGTATCCCTGTAGAGATTGGCAAACTGAAAGTCCTTCATCAGCTGGACCTTAGTAACAACAAATTCTCCGGCAATATCCCAGCGGAAATTTCTAACTTGATTAATTTAGAGAAACTATACCTCTCAGGAAACCAACTTTCCGGTGAAATTCCTGTTTCACTCAAAAGCTTGCATTTTTTGTCTGCTTTCAGTGTAGCATACAATAATCTTCAAGGACCGATACCCACTGGTGGTCAATTTGATACTTTCTCCTCTTCCAGCTTTGAAGGCAACCCACAGTTGTGTGGTTCAGTAGTTCGGCGTTCTTGTCTTCCTCAACAGGGTACCACTACACGTGGTCGCAACTCAAGCAAAAAATTGATAATTGGATTTGCCATTGCAGCCAGTTTTGGCATTGTTTCCTTCGTTTCAGTGTTGATAGTGTGGGTAATATCCAAGAGGAGGATCAATCCAGGTGGAGACCCTGACAAGATTGAACTAGAATCAATTTCTGTCAACTCTTACAGTGGGGTTCATCCTGAGGTTGACAAAGAGGCCAGCCAGGTGGTACTGTTCCCTAACAAAACAAGTGAAATCAAGGACCTTACCATATTTGAAATATTAAAAGCGACTGAAAATTTCAGTCAGGCAAACATAATAGGATGTGGGGGGTTTGGTTTGGTTTATAAGGCAACATTACCAAACGGAACTGCTCTGGCCATCAAGAAACTTTCAGGAGATTTAGGTCTTATGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTCCACAGCACAGCATGAAAATCTGGTTGCACTGCAAGGCTACTGTGTGCATGAGGGGGTTCGGCTTCTCATATACACTTACATGGAAAATGGAAGTCTGGATTACTGGCTGCATGAAAAGGTGGATGGTCCATCTCAAATTGATTGGCCTACTCGTCTGAAGATTGCACAAGGTGCAAGTTGTGGATTGGCTTACATGCATCAAATATGTGAACCGCATATAGTGCATCGTGATATAAAGTCAAGCAATATACTTCTTGATGAAAAGTTTGAGGCACATGTTGCTGATTTTGGGCTGGCTCGACTGATTCTTCCTTATCATACTCACGTTACAACTGAACTTGTAGGTACATTAGGTTACATACCCCCAGAGTACGGACAAGCATGGGTGGCAACTCTGAGAGGAGATGTGTACAGCTTTGGGGTTGTCATGCTTGAGCTGCTAACAGGGAGGAGGCCTGTCGATGTAAGCAAGCCAAAAATGTCAAGGGAGTTAGTTTCCTGGGTTCAACAAATGAGGAGTGAAGGAAAACAAGATCAAGTCTTCGATCCATTTATGAGAGGCAAGGGCTTTGAAGAAGAGATGCAGCAGGTTCTTGATGTAGCTTGCATGTGTGTCAACCAGAATCCTTTCAAGAGACCGAGCATCAGAGAAGTTGTTGAATGGCTGAGGAATGTAGGATTATCCAACCAGCTGATGAATAAAGACTAG 3270 0.4446 MRPLSPRGRPTPSTSPSTPPSSMFMISKLMVFVTLLFPLSGFLVPVQASSCNQLDRDSLLAFSGNISTPSPLNWSVSVDCCLWEGIKCDEDFRVIHLLLPSRGLAGFILPSLTNLTALSRLDLSHNRLSGNLPNQFFSLLNHLQILDLSYNRLSGELPPFVANISGNTIRELDLSSNLFHGKLPPSLLQHLADAVAGGSLTSFNVSNNSFMGQIPTSLLCSNHSSSPSLRFLDYSSNDFAGMIQPGLGACSRLERFRAGSNSLSGPLPGDIFNAVALKEISLPLNKLSGTVGEGIVNLANLTVLELYSNNFTGPIPSDIGKLSKLERLLLHANKINGTLPPSLMNCVNLVMLDVRLNLLEGSLAALNFSGLLRLTALDLGNNSFTGIIPPTMYACTSLKAIRLASNQFEGQISPDILGLQSLAFLSISTNNLSNVTGALRLLMGLKNLSTLMLSQNFFNEIMPDDVNITNPDGFQKIQVLGLGGCNFTGQIPHWLYNLNKLEVLDLSYNQISGSIPPWLHALPELFYIDLSFNRLTGMFPAELATLPALTSQRAYDEVERTYLELPVFANANNVSQMQYNQISNLPPAIYLGNNSLNGSIPVEIGKLKVLHQLDLSNNKFSGNIPAEISNLINLEKLYLSGNQLSGEIPVSLKSLHFLSAFSVAYNNLQGPIPTGGQFDTFSSSSFEGNPQLCGSVVRRSCLPQQGTTTRGRNSSKKLIIGFAIAASFGIVSFVSVLIVWVISKRRINPGGDPDKIELESISVNSYSGVHPEVDKEASQVVLFPNKTSEIKDLTIFEILKATENFSQANIIGCGGFGLVYKATLPNGTALAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHEGVRLLIYTYMENGSLDYWLHEKVDGPSQIDWPTRLKIAQGASCGLAYMHQICEPHIVHRDIKSSNILLDEKFEAHVADFGLARLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVSKPKMSRELVSWVQQMRSEGKQDQVFDPFMRGKGFEEEMQQVLDVACMCVNQNPFKRPSIREVVEWLRNVGLSNQLMNKD* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00028 1089 FunFam Leucine-rich repeat receptor-like protein kinase 881 1087 - -
Lapu9g00028 1089 MobiDBLite consensus disorder prediction 1 20 - -
Lapu9g00028 1089 SUPERFAMILY L domain-like 231 690 - -
Lapu9g00028 1089 ProSiteProfiles Leucine-rich repeat profile. 500 523 IPR001611 GO:0005515
Lapu9g00028 1089 PRINTS Leucine-rich repeat signature 140 153 - -
Lapu9g00028 1089 PRINTS Leucine-rich repeat signature 118 131 - -
Lapu9g00028 1089 SUPERFAMILY L domain-like 50 282 - -
Lapu9g00028 1089 Pfam Leucine rich repeat N-terminal domain 55 89 IPR013210 -
Lapu9g00028 1089 SUPERFAMILY Protein kinase-like (PK-like) 783 1076 IPR011009 -
Lapu9g00028 1089 SMART serkin_6 805 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00028 1089 Gene3D Phosphorylase Kinase; domain 1 767 880 - -
Lapu9g00028 1089 PANTHER LEUCINE RICH REPEAT KINASE 2 372 1078 - -
Lapu9g00028 1089 Gene3D Ribonuclease Inhibitor 367 708 IPR032675 -
Lapu9g00028 1089 SMART LRR_typ_2 498 522 IPR003591 -
Lapu9g00028 1089 SMART LRR_typ_2 371 395 IPR003591 -
Lapu9g00028 1089 SMART LRR_typ_2 115 139 IPR003591 -
Lapu9g00028 1089 SMART LRR_typ_2 419 441 IPR003591 -
Lapu9g00028 1089 SMART LRR_typ_2 607 630 IPR003591 -
Lapu9g00028 1089 SMART LRR_typ_2 322 346 IPR003591 -
Lapu9g00028 1089 SMART LRR_typ_2 445 468 IPR003591 -
Lapu9g00028 1089 SMART LRR_typ_2 631 655 IPR003591 -
Lapu9g00028 1089 SMART LRR_typ_2 140 163 IPR003591 -
Lapu9g00028 1089 Pfam Leucine rich repeat 476 535 IPR001611 GO:0005515
Lapu9g00028 1089 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Lapu9g00028 1089 FunFam Tyrosine-sulfated glycopeptide receptor 1 368 706 - -
Lapu9g00028 1089 Gene3D Ribonuclease Inhibitor 194 273 IPR032675 -
Lapu9g00028 1089 FunFam Receptor-like protein 2 53 170 - -
Lapu9g00028 1089 ProSiteProfiles Protein kinase domain profile. 805 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00028 1089 Pfam Protein kinase domain 806 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00028 1089 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Lapu9g00028 1089 FunFam Leucine-rich repeat receptor protein kinase MSP1 770 880 - -
Lapu9g00028 1089 Pfam Leucine Rich repeat 141 156 IPR001611 GO:0005515
Lapu9g00028 1089 Gene3D Transferase(Phosphotransferase) domain 1 881 1088 - -
Lapu9g00028 1089 Gene3D Ribonuclease Inhibitor 52 193 IPR032675 -
Lapu9g00028 1089 ProSitePatterns Protein kinases ATP-binding region signature. 811 834 IPR017441 GO:0005524
Lapu9g00028 1089 Gene3D Ribonuclease Inhibitor 274 366 IPR032675 -
Lapu9g00028 1089 MobiDBLite consensus disorder prediction 1 17 - -
Lapu9g00028 1089 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 268 363 - -
Lapu9g00028 1089 Pfam Leucine Rich Repeat 633 655 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00028 Lapu-Chr9 265223 269279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00028 14 739 Miscellaneous Gene Families AT1G17240 50.543 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lapu9g00028 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00028 - - gmx:100782574 1932.15