Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00027 ATGGTGGAGTTTCGAAGGTTGTTGCTGTTGCTGTTGCTTTGCATCACTTCCTGCATTCTTTGTTGGATGCCCAATGGTGCTACTGCCGCCACAGATCCAAATGATGCTGCTGCTGTGAAATATTTGTTTCAAAATATGAACTCACCATCCCAGCTTGGTTGGCCTGTTGATGGTGATGATCCATGTGGACAATCTTGGAAAGGCATTACGTGCTCAGGCAACCGTGTTACAGAGATTAAGTTATCTAATCTTGGAATAACTGGGTCGTTGCCTTACGGATTACAAGTCCTGACATCTTTGACCGACCTAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCTTACCAACTCCCTCCATATGTGCAGCGATTAAATCTTGCTTATAATAACATCACAGGGACAGTTCCTTACTCTATTTCAAACTTGACCGCTCTTACAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGGCTGTTAACTTTCTTAATCTTTCTACCCTCTCCACATTGGATCTCTCTTTCAATTCTCTAACAGGTGACATCCCTCAGACTATGACCTCACTTTCACGCATAACAACCATGTATCTGCAAAACAATCAGTTTACAGGCACTATTGACGTTCTTGCTAATCTTCCTCTGGATAACCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCGGAACAGTTCAAGAACATAAACCTACAGAGTGGCGGTAATGGATGGAGCACGGGACCTGCACCCCCACCTCCTCCGGGGGCGCCTCCAGTACCTAAAAGCAACAAACACCACAAGTCTGGAGGGGGAAGCACCACCCCATCAGGTGTTGGTAGCAGCAGCAGCTCAGTTGACGAGGGCAAAAAATCTGGTGTAGGAGGCGGTGCCATAGCTGGAATTATAATCTCTGTCATAGTTGTTGGGGCAATAGTAGCGTTCTTTCTGGTGAAGAGAAAATCCAAGAAGACGACTTCAGATTTAGAAAAGCTGGACAATCAGTCCTTTGCTCCACTTCCTTCAAATGGACTGCATGAAGAGAAGTCCGAGCAAACGTCCTCTGTATCTGACTTGAAGACGTTTGATACTTCTGCCTCAATTAATCTTAAACCCCCACCTATAGATCGACATAAATCATTTGATGATGAAGAGTTCTCCAAGAAGCCCACAATTGAGAAGAAGACTGTAACAGCTCCTGCGAATGTGAAATCATATTCTATTGCTGACCTGCAGATTGCTACTGGTAGCTTCAGTGTGGATCACCTTGTTGGTGAGGGGTCTTTTGGGCGTGTGTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCAGTGAAGAAGATAGATTCATCTGTCCTTTCGAATGATTTGTCAGATGATTTTATAGAAATAATTTCAAACATCTCCATTTTGCATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCAGAGTATGGACAACACCTCTTGATCTACGAATTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGACGAATATAGTAAACCATTGATATGGAATTCCCGTGTTAAGATTGCTTTGGGTACTGCACGTGCTTTAGAGTATCTGCATGAAGTTAGTTCGCCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTACTTGATGCGGAGCTTAATCCTCATCTTTCAGATAGTGGATTGGCAAGCTATATTCCAAACGCAGACAAGATATTGAGTCAAAATGTTGGATCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACTTTGCAAAGTGATGTCTACAGCTTTGGGGTTGTCATGTTGGAACTTCTCAGTGGACGGAAGCCATTTGATAGCTCAAGGTCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGGTAAAATGGTTGATCCTTCATTGAAAGGGCTATATCCTGTTAAGTCTCTTTCTAGATTTGCCGATGTCATCGCTCTTTGCGTGCAGCCGGAGCCTGAATTCCGACCACCAATGTCAGAGGTGGTTCAAGCACTGGTGCGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGTAGTAGTGATCATGGAGGGTCGCAACGAGGAAGTGATGAGCCAGCTCTACGGGAGATCTAA 2178 0.4389 MVEFRRLLLLLLLCITSCILCWMPNGATAATDPNDAAAVKYLFQNMNSPSQLGWPVDGDDPCGQSWKGITCSGNRVTEIKLSNLGITGSLPYGLQVLTSLTDLDMSSNSLGGSIPYQLPPYVQRLNLAYNNITGTVPYSISNLTALTDLNLGHNQLQQGLAVNFLNLSTLSTLDLSFNSLTGDIPQTMTSLSRITTMYLQNNQFTGTIDVLANLPLDNLNVENNNFTGWIPEQFKNINLQSGGNGWSTGPAPPPPPGAPPVPKSNKHHKSGGGSTTPSGVGSSSSSVDEGKKSGVGGGAIAGIIISVIVVGAIVAFFLVKRKSKKTTSDLEKLDNQSFAPLPSNGLHEEKSEQTSSVSDLKTFDTSASINLKPPPIDRHKSFDDEEFSKKPTIEKKTVTAPANVKSYSIADLQIATGSFSVDHLVGEGSFGRVYRAQFDDGEVLAVKKIDSSVLSNDLSDDFIEIISNISILHHPNVTELVGYCSEYGQHLLIYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADKILSQNVGSGYDAPEVALSGQYTLQSDVYSFGVVMLELLSGRKPFDSSRSRSEQSLVRWATPQLHDIDALGKMVDPSLKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDHGGSQRGSDEPALREI* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00027 725 PANTHER LEUCINE RICH REPEAT KINASE 2 74 699 - -
Lapu9g00027 725 MobiDBLite consensus disorder prediction 332 360 - -
Lapu9g00027 725 MobiDBLite consensus disorder prediction 240 293 - -
Lapu9g00027 725 MobiDBLite consensus disorder prediction 248 262 - -
Lapu9g00027 725 ProSiteProfiles Protein kinase domain profile. 419 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00027 725 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 32 257 - -
Lapu9g00027 725 SUPERFAMILY Protein kinase-like (PK-like) 401 691 IPR011009 -
Lapu9g00027 725 MobiDBLite consensus disorder prediction 328 360 - -
Lapu9g00027 725 Gene3D Phosphorylase Kinase; domain 1 381 496 - -
Lapu9g00027 725 Pfam Protein tyrosine and serine/threonine kinase 422 691 IPR001245 GO:0004672|GO:0006468
Lapu9g00027 725 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524
Lapu9g00027 725 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 497 705 - -
Lapu9g00027 725 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 383 496 - -
Lapu9g00027 725 SUPERFAMILY L domain-like 31 236 - -
Lapu9g00027 725 MobiDBLite consensus disorder prediction 268 290 - -
Lapu9g00027 725 Gene3D Ribonuclease Inhibitor 186 247 IPR032675 -
Lapu9g00027 725 MobiDBLite consensus disorder prediction 703 725 - -
Lapu9g00027 725 Gene3D Ribonuclease Inhibitor 36 185 IPR032675 -
Lapu9g00027 725 Gene3D Transferase(Phosphotransferase) domain 1 498 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00027 Lapu-Chr9 245877 254717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00027 1 704 Strubbelig Receptor Gene Family AT1G53730 65.120 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lapu9g00027 PK_Tyr_Ser-Thr 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00027 - - gmx:100807707 1206.82