LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu9g00027	ATGGTGGAGTTTCGAAGGTTGTTGCTGTTGCTGTTGCTTTGCATCACTTCCTGCATTCTTTGTTGGATGCCCAATGGTGCTACTGCCGCCACAGATCCAAATGATGCTGCTGCTGTGAAATATTTGTTTCAAAATATGAACTCACCATCCCAGCTTGGTTGGCCTGTTGATGGTGATGATCCATGTGGACAATCTTGGAAAGGCATTACGTGCTCAGGCAACCGTGTTACAGAGATTAAGTTATCTAATCTTGGAATAACTGGGTCGTTGCCTTACGGATTACAAGTCCTGACATCTTTGACCGACCTAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCTTACCAACTCCCTCCATATGTGCAGCGATTAAATCTTGCTTATAATAACATCACAGGGACAGTTCCTTACTCTATTTCAAACTTGACCGCTCTTACAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGGCTGTTAACTTTCTTAATCTTTCTACCCTCTCCACATTGGATCTCTCTTTCAATTCTCTAACAGGTGACATCCCTCAGACTATGACCTCACTTTCACGCATAACAACCATGTATCTGCAAAACAATCAGTTTACAGGCACTATTGACGTTCTTGCTAATCTTCCTCTGGATAACCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCGGAACAGTTCAAGAACATAAACCTACAGAGTGGCGGTAATGGATGGAGCACGGGACCTGCACCCCCACCTCCTCCGGGGGCGCCTCCAGTACCTAAAAGCAACAAACACCACAAGTCTGGAGGGGGAAGCACCACCCCATCAGGTGTTGGTAGCAGCAGCAGCTCAGTTGACGAGGGCAAAAAATCTGGTGTAGGAGGCGGTGCCATAGCTGGAATTATAATCTCTGTCATAGTTGTTGGGGCAATAGTAGCGTTCTTTCTGGTGAAGAGAAAATCCAAGAAGACGACTTCAGATTTAGAAAAGCTGGACAATCAGTCCTTTGCTCCACTTCCTTCAAATGGACTGCATGAAGAGAAGTCCGAGCAAACGTCCTCTGTATCTGACTTGAAGACGTTTGATACTTCTGCCTCAATTAATCTTAAACCCCCACCTATAGATCGACATAAATCATTTGATGATGAAGAGTTCTCCAAGAAGCCCACAATTGAGAAGAAGACTGTAACAGCTCCTGCGAATGTGAAATCATATTCTATTGCTGACCTGCAGATTGCTACTGGTAGCTTCAGTGTGGATCACCTTGTTGGTGAGGGGTCTTTTGGGCGTGTGTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCAGTGAAGAAGATAGATTCATCTGTCCTTTCGAATGATTTGTCAGATGATTTTATAGAAATAATTTCAAACATCTCCATTTTGCATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCAGAGTATGGACAACACCTCTTGATCTACGAATTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGACGAATATAGTAAACCATTGATATGGAATTCCCGTGTTAAGATTGCTTTGGGTACTGCACGTGCTTTAGAGTATCTGCATGAAGTTAGTTCGCCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTACTTGATGCGGAGCTTAATCCTCATCTTTCAGATAGTGGATTGGCAAGCTATATTCCAAACGCAGACAAGATATTGAGTCAAAATGTTGGATCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACTTTGCAAAGTGATGTCTACAGCTTTGGGGTTGTCATGTTGGAACTTCTCAGTGGACGGAAGCCATTTGATAGCTCAAGGTCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGGTAAAATGGTTGATCCTTCATTGAAAGGGCTATATCCTGTTAAGTCTCTTTCTAGATTTGCCGATGTCATCGCTCTTTGCGTGCAGCCGGAGCCTGAATTCCGACCACCAATGTCAGAGGTGGTTCAAGCACTGGTGCGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGTAGTAGTGATCATGGAGGGTCGCAACGAGGAAGTGATGAGCCAGCTCTACGGGAGATCTAA	2178	0.4389	MVEFRRLLLLLLLCITSCILCWMPNGATAATDPNDAAAVKYLFQNMNSPSQLGWPVDGDDPCGQSWKGITCSGNRVTEIKLSNLGITGSLPYGLQVLTSLTDLDMSSNSLGGSIPYQLPPYVQRLNLAYNNITGTVPYSISNLTALTDLNLGHNQLQQGLAVNFLNLSTLSTLDLSFNSLTGDIPQTMTSLSRITTMYLQNNQFTGTIDVLANLPLDNLNVENNNFTGWIPEQFKNINLQSGGNGWSTGPAPPPPPGAPPVPKSNKHHKSGGGSTTPSGVGSSSSSVDEGKKSGVGGGAIAGIIISVIVVGAIVAFFLVKRKSKKTTSDLEKLDNQSFAPLPSNGLHEEKSEQTSSVSDLKTFDTSASINLKPPPIDRHKSFDDEEFSKKPTIEKKTVTAPANVKSYSIADLQIATGSFSVDHLVGEGSFGRVYRAQFDDGEVLAVKKIDSSVLSNDLSDDFIEIISNISILHHPNVTELVGYCSEYGQHLLIYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADKILSQNVGSGYDAPEVALSGQYTLQSDVYSFGVVMLELLSGRKPFDSSRSRSEQSLVRWATPQLHDIDALGKMVDPSLKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDHGGSQRGSDEPALREI*	726

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lapu9g00027	725	PANTHER	LEUCINE RICH REPEAT KINASE 2	74	699	-	-
Lapu9g00027	725	MobiDBLite	consensus disorder prediction	332	360	-	-
Lapu9g00027	725	MobiDBLite	consensus disorder prediction	240	293	-	-
Lapu9g00027	725	MobiDBLite	consensus disorder prediction	248	262	-	-
Lapu9g00027	725	ProSiteProfiles	Protein kinase domain profile.	419	694	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lapu9g00027	725	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 3	32	257	-	-
Lapu9g00027	725	SUPERFAMILY	Protein kinase-like (PK-like)	401	691	IPR011009	-
Lapu9g00027	725	MobiDBLite	consensus disorder prediction	328	360	-	-
Lapu9g00027	725	Gene3D	Phosphorylase Kinase; domain 1	381	496	-	-
Lapu9g00027	725	Pfam	Protein tyrosine and serine/threonine kinase	422	691	IPR001245	GO:0004672\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu9g00027	Lapu-Chr9	245877	254717	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu9g00027	1	704	Strubbelig Receptor Gene Family	AT1G53730	65.120	0.0	840

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Lapu9g00027		PK_Tyr_Ser-Thr	1.6e-40	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu9g00027	-		-	gmx:100807707	1206.82

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