Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00022 ATGGCCAACAAAATTAAACCAGCTCTTTCCACTATTTCCGGTTCCCTCACCAACACCAAGACCACACTCTTCTTGGCTCTCGTTGCCACTCTCCTTGTTGCGCTCGCTGTCGTCGCCGGAGTCAGCTCTCGCAAGAGCTCCGACCACAATGCCTCCTCCACTTCGTCGCACGCCATCATTAAAAGCGCCTGCAGCAGCACCTTGTACCCGGAGTTGTGCCTCTCAACCATAGTCTCTGAGCCCGGCCTGGCTGACAAAGTTTCCAGCCACAAAAACGTGATAGAGCAGTCGCTTAACATAACCGCGGGAATCGTTGAGCGGAATTACTTCACCGTGCAGAAGCTCTTGGACGGCAAGGGCCTCACCAAGAGGCAGAAAACGGCCCTCCATGACTGCTTGGAAACCATTGACGAGACCCTGGACGAGCTCCACATGGCCATACTTGAGCTCAAAGACTACCCCTCTAAGAAGTCTCTGTCGCACCACGCCGAGGATCTCAAAACTCTCATCAGTTCCGCCATTACCAACCAAGAGACTTGCCTCGACGGTTTCTCTCACGACAAGGCTGACAAAAGACTGAGGCAGCATCTCCAGGCAGGCCAAGTGCACGCGGAGCACTTGTGCAGCAACGCATTGGCCATGACAAAGAACCTCACTGACACTGACATGGCCATGGCCATGCCCAACAACAATTACCACAAAAACGACCGCAGGAAAACCATGGAGGATCCCCATGAAATTATGTGGCCCCACTGGATTTCCGCCGCCGACCGCCGCCTTCTGCAGACGGGTACGGTCACTCCTGACGTCGTCGTGGCGGCGGACGGCAGCGGGAACTTCAGGACGGTGTCGGCTGCGGTGGCTGCGGCTCCTGAGAAAAGTAGCAAGAGATATGTGATCAAGATCAAAGCGGGTGTGTACAGAGAGAACGTGGATGTGCCGAAGAAGAAGACTAACATAATGTTCCTTGGGGATGGCAGAACCAACACCATCATCACAGCTAGTAGAAACGTGGTTGATGGCAGCACCACCTTCAATTCTGCCACAGTAGCTGTGGTGGGTGAAGGATTCTTGGGAAGAGACATAACCTTCCAAAACACAGCTGGTCCCTCGAAGCACCAAGCGGTTGCCCTCAGAGTTGGTGCTGACCTCTCGGCATTCTACAGGTGCGACTTTCTTGCATACCAAGACACCCTTTACGTCCACAGCAACCGCCAATTCTTTATCAGCTGCTACATAGCAGGCTCCGTCGACTTCATCTTCGGCAACTCTGCTGCTGTCATCCAGAACTCCGACATCCACGCCAGGCGTCCCAATCCTGGGCAGAAGAACATGGTCACCGCTCAGGGCCGCCTTGACCCTAACCAAAACACCGGCATTGTCATTCAGAAAAGCAGGATTGGTGCCACCAAGGACTTGGAATCTGTCAAGAGCAGCTTCCCCACGTTTCTCGGGAGGCCATGGAAGGAGTACTCTCGTACTGTCATCATGCAGTCAACCATAAGTGACGTCATCGACCCTGCTGGCTGGCACGAGTGGAATGGCAACTTTGCTTTGAATACCTTGTTCTACGGGGAGTATCAGAACACTGGCCCTGGTGCTGCAACCTCAAGGAGGGTCACTTGGAAAGGGTTTAAGGTCATTACCTCTGCTGCTGAGGCCCAGCGTTTCACCCCTGCCAATTTCATTGCAGGTTCAAGCTGGTTGCCCTCTACTGGATTTCCATTCTCTCTTGGCCTCTAA 1743 0.5376 MANKIKPALSTISGSLTNTKTTLFLALVATLLVALAVVAGVSSRKSSDHNASSTSSHAIIKSACSSTLYPELCLSTIVSEPGLADKVSSHKNVIEQSLNITAGIVERNYFTVQKLLDGKGLTKRQKTALHDCLETIDETLDELHMAILELKDYPSKKSLSHHAEDLKTLISSAITNQETCLDGFSHDKADKRLRQHLQAGQVHAEHLCSNALAMTKNLTDTDMAMAMPNNNYHKNDRRKTMEDPHEIMWPHWISAADRRLLQTGTVTPDVVVAADGSGNFRTVSAAVAAAPEKSSKRYVIKIKAGVYRENVDVPKKKTNIMFLGDGRTNTIITASRNVVDGSTTFNSATVAVVGEGFLGRDITFQNTAGPSKHQAVALRVGADLSAFYRCDFLAYQDTLYVHSNRQFFISCYIAGSVDFIFGNSAAVIQNSDIHARRPNPGQKNMVTAQGRLDPNQNTGIVIQKSRIGATKDLESVKSSFPTFLGRPWKEYSRTVIMQSTISDVIDPAGWHEWNGNFALNTLFYGEYQNTGPGAATSRRVTWKGFKVITSAAEAQRFTPANFIAGSSWLPSTGFPFSLGL* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00022 580 PANTHER PECTINESTERASE 31 570 - -
Lapu9g00022 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 219 IPR035513 -
Lapu9g00022 580 Pfam Pectinesterase 269 565 IPR000070 GO:0030599|GO:0042545
Lapu9g00022 580 ProSitePatterns Pectinesterase signature 2. 413 422 IPR033131 -
Lapu9g00022 580 FunFam Pectinesterase 56 219 - -
Lapu9g00022 580 NCBIfam pectinesterase inhibitor domain 29 219 IPR006501 GO:0004857
Lapu9g00022 580 FunFam Pectinesterase 263 580 - -
Lapu9g00022 580 CDD PMEI-like_3 62 219 - -
Lapu9g00022 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 220 IPR035513 -
Lapu9g00022 580 SMART PMEI_2 55 214 IPR006501 GO:0004857
Lapu9g00022 580 Gene3D - 263 580 IPR012334 -
Lapu9g00022 580 SUPERFAMILY Pectin lyase-like 265 579 IPR011050 -
Lapu9g00022 580 Pfam Plant invertase/pectin methylesterase inhibitor 59 214 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00022 Lapu-Chr9 213135 216582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00022 36 580 Carbohydrate Esterase AT3G14310 68.036 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00022 K01051 - vvi:100251413 817.764